Oncorhynchus nerka (sockeye salmon): 115137396
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Entry
115137396 CDS
T07952
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115137396
03036 Chromosome and associated proteins [BR:
one03036
]
115137396
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
115137396
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
115137396
COMPASS/SET1 complex (yeast)
115137396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
115137396
NCBI-ProteinID:
XP_029529571
LinkDB
All DBs
Position
LG2:complement(28984981..28997417)
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AA seq
571 aa
AA seq
DB search
MDSEVSDFEPAPGLVSTMEGEKAPVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCQDDNPSLEIKYRPKKSREKEAESQRESERNFERQNSTPDYKSEKCRGSN
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDENMPWLSNEEDGPPFSPVRRKK
AVKVKHVKRRENKFDKKKESRRHKQKQKHKDKLRQNNKGDARDGGGQRQCLGPSCVEAAC
ANSKYCSEECGIKLAANRIFEILPQRIQQWQQSPCVAEEQGKKQLERIRRDQQNARIRLT
DMEKRFHELEGIIAKAKQQVVQQDEEGNEGDNEETDLLIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEVTGEHCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNLRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagacttcgagcctgcaccggggcttgtgagcactatggagggg
gagaaggcaccggtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaattgcaatgagtggtttcatggtaactgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccaagacgacaacccatcattggagata
aaataccgtccaaagaagagccgtgaaaaggaggcagagagccagagagagtcagagaga
aattttgaaagacagaacagcactccagattataaatctgaaaagtgccgtggatcaaat
gttaagcgctccgctcgtatgtgtggggagtgcgagccctgcttgaggactgaggactgt
gccacatgcgacttctgcaaggatatgaagaaatttggtggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgatgtccgagccaggaaaatgttgcgtgtgaaggatgaa
gagtttaatttgcgtgaaaggagggataattcctaccaccggcgaagacgatattcagat
gactacgatagtgaggcagaactctacgaaaagtacaaggcggcaggatacgacgaaaac
atgccatggctcagtaatgaggaggacggccctcccttcagccctgtccggcgaaagaaa
gctgttaaggtcaagcatgtgaagagacgcgaaaataaatttgacaagaaaaaagagtca
cggcggcacaaacagaagcagaagcacaaggacaaacttcggcaaaacaataagggcgat
gccagagatggaggaggacagcggcagtgcctcgggcccagctgtgttgaggcagcatgc
gccaactccaaatactgctcagaggaatgtggcataaagctggctgccaaccggatcttt
gagattctccctcagcgtatccagcagtggcagcagagcccctgcgtcgctgaggagcag
ggcaagaagcaactggagcggatccggagggatcagcagaacgcccgcatacgcctcacc
gacatggagaaacgcttccacgagctggagggcatcattgccaaggccaagcagcaggtg
gtccagcaggatgaggaggggaatgaaggggataatgaagaaacagatctgctgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaagtggcattgcgacacatggagagatgt
tatgctaagtatgagagccagacttcttttggttccatgtacccaactaagatcgaagga
gcaacaagactgttctgtgatgtgtacaatccccagagcaagacctactgcaagaggctt
caggtcttgtgcccagagcattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggtccgtaatgtgtttgaggtgacgggagagcactgcagggtttctaagcgc
aaatgtaataagcactacaactgggagaagctcagaagagccgaggtggacctggagcgt
gtccgagtgtggtacaaactagacgagctctttgagcaggagcgcaacttgaggactgct
atgaccaacagggcaggtctacttgctctcatgctgcaccaaaccattcagcacgaccca
ctgacaacggatctccgttgcaacaaggacagatag
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