Oncorhynchus nerka (sockeye salmon): 115137509
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Entry
115137509 CDS
T07952
Name
(RefSeq) glutamate receptor ionotropic, kainate 4-like
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115137509
04082 Neuroactive ligand signaling
115137509
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115137509
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115137509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115137509
NCBI-ProteinID:
XP_029529700
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Position
LG11:complement(25943889..26005766)
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AA seq
680 aa
AA seq
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MNYLRMVELEGLTGHIEFNSKGQRSNYALRIMQNSRDGLRQIGQWHSEQGLSMERKLPSI
NVTDTLFNTTLTITTILENPYVMLRPNHQEMEGNERYEGFCVDMLKELADILKFKYCINL
VGDGVYGVSGTNGTWTGMSPTYYLVSMHFHHHNPTFATVALPICAYLNGWCGVCVCVCVC
VCVWVCVGGCGCGCVHACLFQKADLAVAGLTITAEREKVIDFSKPFMTLGISIMYRVHLG
RRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYNPHPCLKGRCNLLINQY
SLGNSFWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESVDDLADQTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMHSKQPSVFVKSTEEGIA
RVVNSNYAYLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVYRDEFDLAILKLQ
EDNRLEILKRKWWDGGKCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAIFMAVLEFMWFL
RQTPGTELSVCEEMLRELQGIVLCRDSLQLRRRRGTTMLRPRSLPLEERRARAAAVSLSN
GKLCGAAAGLPLSEPLSHRLAQEAALVARGCSHIRICPECRRFQGLRAMRPGGGPSHGAS
PTHSEESIEWEKTTNSSEPE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctgaggatggtagaattggaaggactaacgggccacattgaattcaacagc
aaaggccagcggtccaactacgccctgcggatcatgcagaacagtagagacggcctaagg
cagattggccagtggcactcagagcagggcctgtccatggagaggaagcttccgtcaatc
aacgtgacagacactctcttcaacaccaccctcaccatcaccactattctggagaaccct
tacgtgatgctacgaccgaaccaccaggagatggaagggaacgagcgctatgagggattc
tgtgtggacatgctgaaggagctggcggacatcttgaagttcaagtactgcatcaatctg
gtgggggacggggtgtacggggtatcggggaccaacggtacctggacgggcatgtcgcct
acttactacttagtttccatgcatttccaccaccacaacccaacttttgctactgtagct
ttacctatctgtgcatatctgaatggttggtgcggtgtttgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgggtgtgtgtgggtgggtgtgggtgtgggtgcgtgcatgcgtgtctattc
cagaaagcggacctagccgtagcggggctcaccatcaccgcggagagggagaaggtcatc
gatttctccaagccttttatgaccctgggaatcagcatcatgtaccgtgtgcacttgggc
cgcagacctggctacttctccttcctagaccctttctcccctggggtgtggctcttcatg
ctgctagcctacctggcagtcagctgtgtgctctttctggttgccagactcaccccctac
gagtggtacaatccccacccctgcctgaaggggcgctgtaacctcctcatcaaccaatac
tcgctaggcaacagcttctggttccccgtgggggggttcatgcagcaggggtccaccatc
gccccccgcgccctctccacgcgctgcgtcagtggagtatggtgggcgttcaccctgatc
atcatctcgtcctacacggccaacctggctgccttcctcactgtccagaggatggaggtg
cccatcgagtcagtggacgacctggctgatcagacggccatcgagtacggcaccatgcac
gggggctccaccatgaccttcttccagaactcgcgctaccagacgtaccagcgcatgtgg
aacttcatgcactccaagcagcccagtgtgtttgtgaagagcacggaggagggcatcgcc
cgcgtggtcaactccaactatgcctacctgctagagagcaccatgaacgagtactaccgg
cagcgcaactgtaacctcacccagataggaggtctgctggacaccaagggctacggcatc
ggcatgccagtggggtcagtgtaccgggatgagtttgaccttgccatcctcaagctgcaa
gaagacaaccgcctagagatcttgaagaggaaatggtgggatggtggcaagtgtccaaag
gaggaggatcaccgtgccaaaggactaggcatggaaaacataggcggtatcttcgtggtg
ctggtgtgtggtctgctggtggccatcttcatggcggtgctggagtttatgtggtttctg
cggcagacgcccggaacagagctgtcggtgtgtgaggagatgctacgggagctccagggg
atcgtcctgtgccgggacagcctacagctgaggcgtcggcgggggacaaccatgctccgt
cctcgctccctgcccctggaagagcgccgggcaagggcggctgccgtcagcctgagcaat
ggcaagttgtgtggcgctgccgccggcctgcccctctccgagcccctctcccacagactg
gcgcaggaggcggctttggtggcgcgtggctgcagccacatccgcatctgccccgagtgc
aggcgcttccaggggctgcgcgccatgcgtcccgggggaggccccagccacggcgcctcg
cccacccacagcgaggagagcatagagtgggagaaaacgaccaacagcagcgaacccgaa
taa
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