Oncorhynchus nerka (sockeye salmon): 115137761
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Entry
115137761 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 16-A-like
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115137761
04121 Ubiquitin system [BR:
one04121
]
115137761
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115137761
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115137761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_8
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
115137761
NCBI-ProteinID:
XP_029529941
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All DBs
Position
LG11:9196183..9227345
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AA seq
680 aa
AA seq
DB search
MKTYRHTEGGIEHTSCVGSERVRGCTDHLTKMGVLQLHNPTLPATLLHRANHMRLSGTLC
DVIITVDGQEFPAHRTVLACTSKMFEILFHRSSLRYALDFLSPKTFQQILEYAYTASLQA
TAEDLDDLLYAAEILEIEYLEEQCLKVLETIQSEEKQDHLSLSGRNHGSGESEQSRARHW
RNMLISKKHSMQEGGINPTALHHLALYHMTDRSPSGPGGLPMGLPVASPTQDGGVSLEGL
GQSPLQYSLNGAQEPFLPLAKRIKTEDNNMQVDEANGYEGRSNSGGEGAESDQPREEGPG
TPQRGSVITSAREQHSGQEEGGIVGNNSPLDSFPGLAEKHLASLYSSMPSNHIGELGLPM
PMSVAPSLAMSLDLRAYGGLLNQGLLHREILSRLGQFAAGMRREGQSQTQSSGDCGLQLH
DREVMEQHRKLHSEGEKEHGCEFCGKHFMDSVRLRMHMLSHSAGAEALVCDQCGATFSAE
DALEAHRQTHTGTDMAVFCLLCAKRFQTQKALQQHMEVHAGMHSYICSHCDHPFPSHTTL
KRHLRSHTGDHPFECEFCGSCFRDDGMLRGHKRIHTGEKPYECNGCGKRFSLKHQLETHY
RVHTGEKPFECKICHQRSRDYSAMIKHLRTHNGASPYQCTICQDFCPSLAAMQKHMKSHR
PEDVPPDWRIEKTYLYVCYV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttatagacacactgaaggtgggatagaacacacctcatgcgtgggctcagag
agggtccgaggctgtacggatcatctgactaagatgggtgttctccagctccacaacccc
acgctccccgccacgctcctgcacagggccaatcatatgcgtctgtcgggaacgctgtgt
gacgtaatcatcacggtggatggccaggagttcccggcccaccgcaccgtcctggcctgc
accagcaagatgtttgagattttattccaccgcagcagcctgcgctacgcactcgatttc
ctctcccccaagaccttccagcagatcctggagtacgcctacacggcctccctgcaggcc
acggccgaggacctggatgacctgctgtacgccgctgagatcctggagatcgagtacctg
gaggagcagtgcctcaaggtcctggagaccatccagtcagaggagaagcaggaccacctg
agtctgagtgggaggaaccacgggtctggagagagtgaacaaagcagggcaaggcactgg
aggaacatgctaatctccaagaagcattccatgcaggagggtggtatcaaccccaccgcc
ctgcaccacctggcactgtaccacatgactgacaggagtccctctgggccagggggacta
cctatggggctccctgtagccagcccaacacaagatggaggggttagtctggagggcctg
ggtcagtctccactgcagtacagcctcaatggagcccaggagccattcctgcctctggct
aagaggataaagacagaggacaataacatgcaggtggatgaagccaatggctacgagggc
cggtccaacagcggaggggagggggctgagtcggaccagccaagagaagagggcccgggg
accccccaaagaggcagtgtcatcacatctgctagagagcagcactcgggccaagaggag
gggggcatagtggggaacaactctcctctggacagtttccctgggctggctgagaaacac
ctggcctccctctactcctccatgccgtccaatcacataggggagttggggctgcctatg
cccatgtcggtggccccttccctggccatgtccctggacctgagggcctatggggggctc
ctgaaccagggcctgctccacagggagatcctcagcaggctgggacagtttgctgcaggg
atgaggcgggagggccagagtcagactcagagcagtggggactgtggtctccagctgcac
gacagagaggtcatggagcaacacaggaagctgcacagtgaaggagagaaggaacacggc
tgtgagttttgtggcaaacacttcatggacagtgtacggctcaggatgcacatgctctct
cactcagctggagctgaggccctggtgtgtgatcagtgtggagctacattctctgctgaa
gatgctctggaggcccacagacagacacacacagggacagacatggcagtgttctgtctg
ctctgtgccaagcggttccagacccagaaggctctgcagcagcacatggaggttcatgca
gggatgcacagctacatctgcagccactgtgaccaccccttccccagccacaccaccctc
aaacgccacctgcgctcacacacaggtgaccacccgtttgagtgcgagttctgtgggagc
tgtttccgggacgatggcatgttgaggggacacaaacgtatccacacgggagagaagcct
tacgagtgtaacggctgtggcaaaaggttcagcctcaagcatcagctggagacccactac
cgcgtgcacacaggcgagaaaccatttgagtgcaagatctgtcaccagcgatccagagac
tactctgccatgatcaagcacctgcgcacccacaacggagcatcgccctaccagtgtacc
atctgccaggacttctgccccagcctggcagccatgcagaaacacatgaagagccacaga
cccgaggatgtgcccccggactggaggatagagaagacctacctgtacgtatgctacgtc
tga
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