Oncorhynchus nerka (sockeye salmon): 115137782
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Entry
115137782 CDS
T07952
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115137782
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115137782
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
Egg_lysin
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
115137782
NCBI-ProteinID:
XP_029529958
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Position
LG11:13797041..13821873
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AA seq
939 aa
AA seq
DB search
MSRLYYRRTDNSSYRDRIALRIVRAESELSVLEKNYLGAVDKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVEMLLNHKK
PSGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALASPSLLALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLLSLCYLVSPKSRYGHFIR
QPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHLFKITRAKKTETFGTIGRRAALNVRTNHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVAESKPSEEAGASIL
VYSDHSFKYSPKFSPATPKTNMFPDTTSILQQRAALSSTSTSPSTSQGLNRLVNGSVLPS
WASTDTSSSPTSSTPISSSSSTPISSSSSTPIQCSTKDRLARKDFPKDICDFGLYSVSEE
MGEVDLEELDCDGEKEEQGGARERTCTEKEENEGKSSEQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgactgtactacaggaggacagacaactcctcctacagggaccggatcgctctg
aggattgtcagggcggagtctgaactgtctgtcctggagaagaactacctgggagcagtg
gacaaaggagactatgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctattgagaat
gagaacctggagattatagagctgctgctcagctttaacgtgtacgtcggtgacgctctg
ctacacgccatccgtaaagaggtggtgggggccgtggaaatgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccatcctattggacaagcagttctctaactttact
cctgacatcacacccatcatcctggcagctcacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtccatgccccagccacatgaggtgcgctgtaactgcatggag
tgtgtgtccagctctgatgtggatagtctgcgtcactcccgctcacgtctcaacatctac
aaggccctggccagcccatcactcctggccctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaggaactcagcaaggtagagaatgagtttaagtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccaga
agttccagagaactagagctgatcctgaactacagagatgacatcaaccctctactggat
gagaacaccaacgatctggccagactcaaactggctatcaaatacacacagaaagagttt
gtagcacagcctaactgtcagcagctgcttgcgtctcgttggtatgatgagttccctggg
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttatccctctgctacctggtctcgcctaagagccgctatggacacttcatcagg
caacccttcatcaagtttatctgccacacaacgtcatatctcaccttcctgttcctcctg
ctgctggcctcccagcacatcgtctctacagaccctaacagacaggggccgcctcctact
gtggtggaatggatgatactaccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggagggttccaggactacatccatgactggtggaacctcatggactttgtt
atgaactctctgtacctggctaccatctctttgaagttcgttgcctatgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccctggtagcagaggctgtg
tttgccattgctaacatcttcagctccatccgcctcatctctctgtttacagctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctggacatccttaagttcctg
tttatctactgcctggtgcttctggccttcgctaacggactcaaccagctctacttctac
tacgagacagacgagggactaaagggatgcaagggcatccgctgcgcaacacagaacaac
gctttctcaacgttgtttgagacgctccagtcgttgttctggtctatctttgggttgatc
agtctgtatgtgaccaacgtggaggcagatcaccagttcacagagtttgtaggggccacc
atgtttggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcctaccaacacatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggggggactctgccttctccattcaacatc
atccctagccccaagtcaatctggtacttcatctgctggatcaggaaacacctcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgccttaaac
gtaagaacaaaccaccagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggactgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaggtcctcgggatgatgaaggggaaggtgggg
cccggaggtgggggcgtggcagaaagtaaacccagtgaagaggcaggggcctccattctg
gtctactctgaccactccttcaagtactcccccaagttctccccagccacgcctaagacc
aacatgtttcccgacaccacatccatactccagcagagggcagccctctcctccacctcc
acatccccttccacctctcagggcttgaaccgactggtcaacggctctgtgctaccctct
tgggcctccactgacacctcctccagccccacctcctccactcccatctcctcttcctcc
tccactcccatctcctcttcctcctccactcccatccaatgctccactaaagacaggctg
gccaggaaagactttcccaaagacatctgtgactttgggctctactctgtgtctgaggag
atgggagaagttgacctggaggagctggactgtgatggagagaaggaggagcagggtgga
gcgagggagaggacgtgtacagagaaggaagagaacgaagggaaatctagtgaacagtag
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