Oncorhynchus nerka (sockeye salmon): 115137882
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Entry
115137882 CDS
T07952
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115137882
04519 Cadherin signaling
115137882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115137882
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115137882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
Fibulin_C
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
115137882
NCBI-ProteinID:
XP_029530024
LinkDB
All DBs
Position
LG2:30008132..30255862
Genome browser
AA seq
926 aa
AA seq
DB search
MNLGSVLILTCTLVVDTSWATKADQPPKPPCRPGFSESFYTVFVSRDLLQGQNILKDTTL
SSERVKFDDCQHSKAVDFESSDPNFSVRPDGSVYAEQEVANLSDPVQFMVTARGGHDPHI
WETTVKLALAGHPPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQRSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTVAAGLDREK
VSQYTIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNEPPVFPSNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIHQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
SPPASGTGTLQIHLIDVNDNAPVLLPKEAQVCERASPRSRVNITASDADADPHVGPFVFE
LPSYPPSVRRNWTASRISGDYAQLRLRIPYLDAGVYEVPIIVSDSGNPPLSNRSMIKVKV
CPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLTMVLVFVMWMKRREKERQAKPLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEALDHIICKPTGVRRVDERPVIAESQY
PIRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGD
QDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggctccgttcttatactgacgtgcaccttagttgtggacacatcttgggcg
accaaggcagaccaaccacctaaacccccatgcagaccaggcttttccgagagcttctac
acagtctttgtctctagggatctactgcaaggccagaacattctcaaagacaccaccctg
tcgagtgaacgtgtgaagtttgacgactgtcagcacagcaaggctgtggacttcgagagc
agcgaccctaacttcagtgtgcgtcctgacggctcggtgtacgcggagcaggaggtggcc
aacctgtctgatccagtccagttcatggtgaccgcccgcggaggtcatgaccctcatatc
tgggagaccacggtcaagctggccttggctggccacccgccttctgttcctgtgagtcag
attggagtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaagaagctcttctgccaatggtctgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgcccgaaaactctagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaggggatacgatacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacattgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcgtcctaccatctgcgggcccatgctgtggac
atgaacgggaacaaggtggaaagccccatagacctgtacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaacggctctgtggctgaaggctctaaa
ccaggcacgttagtgatgcaggtgaccgccaacgactcagatgacgacaccacagccaat
gggatggtgcggtaccggatcctatcccagaccccccacatgccaatccccaatatgttc
accatcaacagcgagacgggagacatcttcacggttgccgccggcttggacagggagaaa
gtgtcccagtacaccatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaaccctcccgag
ctgacagccaggacgttttctggggaggtcccagagaacagggtgaatgtggtggtggcc
aatctgacggtgattgacagggatcagcctcacagccccaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctgtcaacaatgac
ggcatggtcactgtggtcaagccagtggactatgagcagaacagggccttcatgctgacg
gtgatagtctctaacaaggcccctctggccagtgggatccagtcttcgctccagtcttca
gcgggggtcaccatctccgtacaggatgtcaacgaaccccctgtcttcccttccaacccc
aagtccatccgtttcgaggagggtgtccctgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccatcagactgtccggtactcgaagctgtctgacccagct
aactggctgaggatcaacaggaccaacggtcagatcaccaccatggccgtgctggacagg
gagtccatgtatgtcaggaacaacatctatgaggccaccttcctggctgccgacaatggc
tctcccccagccagtgggacaggcaccctacagatacatctgatagatgtgaatgacaac
gctccagtgctgttgcccaaggaggcccaggtgtgtgaacgggccagcccccgctccagg
gtcaacatcacagcctccgacgccgacgctgaccctcacgtggggccttttgtgttcgag
ctgccctcctacccccctagcgtccgacgcaactggaccgcctcccgcataagcggtgac
tatgcccagctgagactgaggattccctacctggatgcaggggtgtatgaggttcccatc
atagtgtcggactctgggaacccgcccctctctaacaggtctatgataaaggtcaaggtg
tgtccgtgtgacgacaacggagactgtactaccaccggagctgtagctgccgctggactg
gggaccggagcgatcatagccatactcatctgtatcatcatactgcttacaatggtactg
gtgtttgtgatgtggatgaagcggagggagaaggagcgtcaggccaagcccctgttgatt
gacccagaggacgacgtcagagacaacatcctgaaatacgatgaggagggaggaggagag
gaggaccaggactatgacctaagccaactgcagcagcccgaggctctggaccacatcatc
tgtaaaccaacgggggtgcgcagggtggacgagaggcctgtcattgctgagtcccagtac
cccatcagacctagcctgcctcatcccggagatattggagacttcatcaacgacggtctg
agggcagcagacaacgaccccacagcccctccctatgactccctgctggtgtttgactat
gagggcagcggctccacggccggctctgtcagctccctcaactcctcaagctcaggggac
caggactacgactacctcaacgactggggcccccgcttcaagaagctggctgacctctac
ggcggaggagacgacgactga
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