Oncorhynchus nerka (sockeye salmon): 115137899
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Entry
115137899 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: dynactin subunit 1-like
KO
K04648
dynactin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04814
Motor proteins
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115137899
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115137899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115137899
03036 Chromosome and associated proteins [BR:
one03036
]
115137899
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115137899
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115137899
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
115137899
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
115137899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
115137899
NCBI-ProteinID:
XP_029530048
LinkDB
All DBs
Position
LG12:1395855..1430353
Genome browser
AA seq
1310 aa
AA seq
DB search
MYIFNFRLTNKFFWSIIPNLTLQYRSISGPTSVLSGIVMISGSPLLSKMSADGGGKPAKV
GSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFV
RQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEIPKSVKQTPVSKKSVTRRSTKWDTPG
RLSSSSSLPSLLMAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLPSGIPATSGAPPP
ATPSKEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTKMQEQQT
DLLKQLKEAKKDARDALEAKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLKE
KVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSEKQEHVK
LQKQMDKKNGELETLRTQKQKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDL
EEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETV
ADYQQTINKYRQLTASLQDANKELTSAQNANAEQVHPPPPAELFDFKIKFAETKAYAKAI
EMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEK
FDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQVYTQMGT
LYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTEDCTVQLA
DHIKFIQSALDCIGAEVVRLRAFLQPGQEGLALNILLKDLDTTCSDIKQFCKKIRRRMPG
TDVPGVPASLSFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNALKLD
DVAFKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAMQEGEYDAERPQRKAPPVEAR
AAALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDA
DERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQSKSTIEG
LRAPPASGIASIVTGSAGVALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKHLKNENNR
LKAEKMRAQLASLPPLHVPKLHLREATSSSSPPAEGPLHGALYRKTEQLLGTLLKMTATV
KVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSDFATFPI
SSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtatatttttaacttccgtttaaccaacaagttcttttggagcatcataccaaaccta
actttgcagtacaggtccatatcaggccctactagtgtcttgtcaggtattgttatgatt
tccggcagccccctcctgagcaagatgagtgcggacgggggaggcaagcctgccaaggtg
ggctcggtggtggaggtgatcggtaagggccagcgtggcacggtggcgtatgtgggcgcc
acgctctttgccacgggtaagtgggtgggtgtgatcctggatgagcctaagggcaagaat
gatggcacggtccaggggaagagatacttccagtgtgatgagaactgcggcatctttgtg
cgccagtcccagatccagctagtggaagatggtgccacctctccagacatcccagaatct
tccactgccaagttcctgtccaagcagaaagacatccctgagattccaaaatcagtcaaa
cagacgcccgtttctaagaagtccgtcacccgtcgtagcaccaagtgggacactccaggt
cgtctctcctcctccagctccctcccctccctcctcatggctccccgggccatcggcttg
tccagctctcggtccagggaggatgtcagcgagggcagcctgtcttccaagggtgcgctg
ggggctcctgtcgtccccctgcccagcggcatccccgccacgtccggagctccacccccc
gccacccctagcaaggaggaagagtctctgcgtggccaggtgaaggacctagaggagaag
ctggagaccctgaagatgaagcgggcggaggacaaggtcaagctgaaggagctggagaaa
cacaagattcagctggagcagctccaggagtggaagaccaagatgcaggagcagcagacg
gacctgctgaaacaactcaaagaggccaagaaggatgcccgggatgcattggaggccaag
gaccgttatatggaggagatgtcagacacggcggacgccatcgagatggccaccctggac
aaggagatggccgaggagcggtccgaaagcctgcaggtggaggtggagtcgctgaaggag
aaggtggaggaactcaccatggacctggagataattaaacacgaggttgaggagaaaggt
tctgacggagctgcctctagttaccacgtaaagcagctggaggagcagaacagcaggctg
aaagatgctctggtcaggatgcgtgacctgtcgtcgtctgagaagcaggagcacgtgaag
ctgcagaagcagatggacaagaagaatggagagctggagactctgaggacccagaagcag
aaactacaggaggagatgaagcaggctgaggccaccattgatgagttgaaggagcaggtg
gatgctgctctcggggcagaggagatggtagagactctaactgagaggaatctggacctg
gaggagaaagtcagagagctgagagagacagtcactgacctggaagcgatcaacgagatg
aatgacgagcttcaggagaacagccgagagacagagatggagctgagggagcagttggac
ctgaacggggccagggtgagagaggcccagaagagagtggaggctgctcaggagactgta
gcagactaccagcagaccatcaacaagtaccgccagctcactgccagcctgcaggatgcc
aacaaggaactgaccagtgctcagaatgccaacgcagagcaggtccatcctcctccacca
gctgagctgtttgacttcaagatcaagttcgctgagaccaaggcctacgccaaggccata
gagatggagctgaggaagatggaggtgggccaggccaacagacaggtgtctctcctcaca
tccttcatgcccgactccttcctgcgtcacggaggagaccacgactgtatcctggtgctg
ctgctcataccaagactcatctgcaaggctgagttgatcagtaagcaggcccaggagaag
tttgatctgaacggtaaccccgtggagaggactggggtgaagatgagaggaccacctgga
gagcagctcagcttcgcctcaggactggtctactctctcaccctgctgcaggccacgctg
cacaaataccaacaagctctgaactgctgcagtgtgcaggtgtatacgcaaatggggact
ctctactcagagatgagtgtccatgagcggtccctcgacttcttcattgaccttctgcac
aaagaccagctggatgagactgtacacgtggagcctctcaccaaggccatcaagtactac
cagcaactgtacagtatccacctagctgagcagactgaagactgcaccgtgcagctggct
gatcacatcaagttcatccagagtgcgttggactgtatcggtgctgaggtggtgcgtctc
agggctttcctgcagccgggacaggaggggctggctctgaacatccttctgaaggacctg
gacaccacgtgcagtgacatcaaacagttctgtaagaagatcagacgcaggatgccaggg
accgatgtaccaggggtgccagcctctctgtcttttggagctccggtgtcggagacgctg
acggactgcaggcgtcagctgacgcgggtggttgctgtgctacaggaggtggctgcggcg
ggggcacagatggtcgctcctctcggggagcaggaggggctcaacgctctaaaactggat
gatgtggccttcaaggcagttgaacaggtgtatgggtcccaaggtctaaacccccatgag
tgtctgcgtcagtcctgcagcgctgtcatctccaccatgaacaagatggccactgccatg
caggagggagagtatgatgctgagagaccacagagaaaggctcccccagtagaggctcgt
gcagcagcactcagggcagaaatcactgatgcagagggcctgggagtcaaactggaagac
agagacactgtcatcaaggagctcaagaagtcacttaagatcaagggagaggagttgagt
gaagcccatgtccgtctcagtctcctggagaagaagctggacacgtcgactaaagacgca
gacgaacgtgtggagaagatccagaccaaactggatgagactctggccctgctcaagaag
aaggagaaggagtttgaggagaccatggacgccctgcaggcagacatcgaccagctggag
gcagagaaggcggagctgaagcagcgtctctccagccaatcaaagagcaccatcgagggc
ctcagggccccgcctgcctcgggcatcgcctccattgtcacgggatccgccggagttgct
cttgccccgggagcagggggtctgtctgggcccatgcaggtggtggactcccctctcctc
cgccagcaggtggaggctcagagactgggtatcaaacacctgaagaacgagaacaacaga
ctcaaggcagagaagatgagagcccagttagcctctctccctcccctccacgtccccaag
ttacacctgagagaggccacctcttcttcctctccccctgctgaggggcctctccacggg
gctctctacaggaagacggagcagctcctagggaccctgctcaagatgaccgccacagtt
aaagtggtcgacatcaccgggaagacaccagtgagtgctagtgctcagctcttggaccag
acggctcggctgcagagcctgagtgacgccctggacaagctgaagggtgaagtggcagag
cacgtggtttctcagcagcctggggcaaaggtctcctctgactttgccacctttcccatt
tcctcttttgtcaaggcgaaggaggagaagcagggaggcacggtgtttgtaggccgcgtg
gccatcccgtgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacagcaacac
ctgcagcaagtgcaccgcctcctcatagcctaa
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integrated database retrieval system
