Oncorhynchus nerka (sockeye salmon): 115137908
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Entry
115137908 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04217
Necroptosis
one04622
RIG-I-like receptor signaling pathway
one04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115137908
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115137908
04625 C-type lectin receptor signaling pathway
115137908
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115137908
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115137908
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115137908
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C67
115137908
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115137908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
115137908
NCBI-ProteinID:
XP_029530057
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Position
LG12:1835451..1849828
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AA seq
884 aa
AA seq
DB search
MSGAQDHKRRQPPKMYLVGLQPKDSGPVGRYHPTATREPLSGARGGKEQGRPTVGKGTPL
YVQMGQPGELAEAELRYRGPLTRGSTAVLFGVQLKDSAVGRGNSNGSYKGHQLFTCPEAS
ALFLPANQIRLRRWSRANDDHHINALPPQPQPPIGNIIARTAESSPSLAPVPVLARNPSS
PPPFQVGHRVCFPLEDTVHGGEVRFCGALPGRTSTGVFVGILLDNAVGNWDGSYKGEKLC
SISSSLYGCLLPISKVSPEPRSRRHTPPLQNPKPVLKPTQPPAPVSSPASTPKIALMPPQ
LLSAKLALKPPPLPSPKPFTKPHPLPPTPPTIKPPTLPSPTATDQPQLLNGSPGPLSPGR
GDGLDAEENGDAGLEVELEVGSMVEVNDPPLFGVIRWIGRIIGVSQLVSGIELDQELTAG
TDGSYLGERHFRCPANKGLFVKLQNCRRDSRFPAPETPVNQVERCNSIAFAEWGSERVEE
HTPPVQGDEARDMYQGCKRGIQGHLNSCYLDASLFSLFSCCSSVDWVLLWPSNPSDGPHC
SQAQDLLRCEIVNPLRRFGYVCASKTMALRRLLEAESSDTGFTNQEKDPEEFLNKLFQLL
RVEPLLKIRSVTQNQQPQECHLYQLFPPSVPLSPSSPVPLSPSLSPIPLSSPAVLMRVAS
VQTLLETSFLHAGLKFAEAPSCLPLLMPRFGKDFKMFDAILPSLTIDITDLLDDTLRQCS
ICQAVAEWECLECYDDLDITPGRLKQYCHTCNTQVHIHKKRQSHSPCQVGVAGGPWTGPL
HGTRQRLALFAVTCIETSHYVSFVKHGPRPNDWLFFDSMADREGGENGFNIPQVRACPEV
GRYLSLSAEELGRLDPASLRESARRLLCDSYMCLYHSPELSLYK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcccaggaccacaagagacggcaacccccaaagatgtacttggtgggtctc
caacctaaagattcaggaccagttggaaggtaccatccgactgctacgcgggaacctctg
tcaggagcaagaggggggaaggagcaggggcgaccaactgtgggtaaaggcacccccctc
tatgtccagatgggccaaccaggagagctggcggaggcggagctgaggtatcgaggaccg
ctgaccagaggaagtactgctgtgttgtttggggtgcagctgaaggactcagcagtgggt
agaggcaacagtaatggttcttacaaaggccaccagctctttacctgtcccgaagcctcc
gccctcttcctaccggccaatcagattaggctacgacgctggtcccgtgccaatgacgac
catcacatcaacgctcttcctcctcaacctcaaccccccattggtaacatcattgctaga
acggccgaatcgtctcccagcctggccccagtcccagtcctggctcgaaaccccagctcc
ccacctcccttccaggtgggccacagggtgtgcttccctctggaggatactgtccatggg
ggagaggtgaggttctgtggggccctgcctggacggacctccactggggtgttcgtagga
atcctgctggacaatgcggttggtaactgggatggttcatataaaggagagaagttgtgc
tccatctcctcttctctgtatggttgcctgctacccatctccaaggtgtcccctgaacca
aggtcacgccgccacactcctcccctccagaaccccaaaccggtcctcaaacccacccaa
ccaccagctcctgtatcctcacctgcctccaccccaaagatcgctctgatgcccccccaa
ctcctctcagccaaactggccttaaaacctccacccctccccagccccaaacctttcacg
aaacctcacccccttcccccaacccctcccaccatcaaacccccaaccctgccctccccg
accgccaccgaccaaccacagctcttgaacggttcgcccggtcccctctctccgggtcga
ggtgacggattggacgctgaggagaacggagacgcgggattggaggttgagttggaggtg
gggtccatggtggaggtgaatgacccacccctttttggagtgattcgttggattggacga
atcattggagtttcacaattggtgtcaggaattgagctggaccaggaactgaccgctgga
acagacggcagttaccttggcgaacgccacttccgttgccctgccaacaaggggctgttc
gtcaaactccagaactgcaggcgggattccagattccctgcccctgagacaccggtcaat
caggtggagcgctgcaactccatagcgtttgccgagtggggcagtgagcgcgtcgaggag
cacacccctccagtccagggggacgaggccagagatatgtaccagggctgtaagagaggc
atccaaggccacctcaactcctgctacctggacgcctcactattcagtctgttttcgtgc
tgcagttcagtagactgggtgttgctgtggccctcgaacccctcagacggcccccactgc
agccaagcccaggacctgcttcgctgtgagatagtcaaccccctacgcaggtttggctat
gtatgtgccagtaaaaccatggccctgagaagactactggaggctgagagtagtgacaca
ggcttcaccaaccaggagaaagacccagaagagttcctcaacaagcttttccagctcctc
cgggttgaacctcttctgaagatcaggtcagtgacacagaatcagcagcctcaggagtgt
cacctctaccagctcttccctccatccgttcccctctctccctcttcccctgtccctctg
tctccgtccctcagtcccatccctctctcctcccctgcagtactcatgagggtggccagt
gttcagactctgttagagacatcttttctccacgcgggactaaagtttgctgaggcccct
tcctgcctccccctcctcatgcctaggtttgggaaggacttcaagatgtttgacgccatc
ttgccttcactcaccatcgacatcacagacctgctggatgacactctcagacagtgcagt
atttgccaggcagtagcagaatgggagtgtctagagtgttatgacgacttggacatcaca
cctggtcgtctcaaacagtactgccacacctgcaacactcaggtgcacatccacaagaag
cgccaatcccacagtccgtgtcaggtgggtgtggctgggggtccatggaccggcccactg
catggaactcgtcagcgattggctctctttgctgtgacgtgcatcgagaccagccactac
gtgagcttcgtcaagcacggaccccgccccaacgactggctattctttgacagtatggcc
gacagggaaggcggggagaacggtttcaacattccccaggtgagggcgtgtccagaggtg
ggccgctacctcagcctatcggcggaggagctgggcaggctagaccccgcctccttgaga
gagtccgctcgccggctgctgtgtgactcctacatgtgtctctaccacagccccgagctc
agcctgtacaagtaa
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