Oncorhynchus nerka (sockeye salmon): 115137979
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Entry
115137979 CDS
T07952
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115137979 (lrp10)
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115137979 (lrp10)
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Phage-tail_3
Circo_capsid
Motif
Other DBs
NCBI-GeneID:
115137979
NCBI-ProteinID:
XP_029530204
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Position
LG12:4044096..4052304
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AA seq
820 aa
AA seq
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MTASFNLCVLNVLFVTAYSSLELASSTAHCGQSPQVLEAPRGEIRSSVHHSWSYRPRPFN
CSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITFCGSDLPKPMELMGGNITVT
HHFLPHLFPVSAFCLGYVRDSGECPVVDFECLGGRCLPLSWRCNGQTECLGEGMGLGTDE
QECDGEIEIQDPEHDKVVVTTTTPESYIEREREGETGREKSGGRDWETAPVEVEKEEKEV
EEDGDYTKVKEPDNPMEDYWEFLPRQLPSPQPHRAHPSPGMTQAPIEWPCGGLLQTFYGT
FAPPSIKGPPLFCVWTLDPQDSRPLKLDLQLLELGPGDTVTITNRQQGTGELIKTITSES
SYKAIQVESRTGLLSLTYHTLPGSEGLGFNATYRVGGYCPPWEGKCGGAAGGCYTQEQKC
DGRWDCPETGHDEAGCRGCPRDQFACGGVGQRAVLAGHNFIGRPVCFPAKERCNYQLYCA
DGSDEKDCTICQPGTFHCDSNRCVFESWSCDGQVDCKDGTDEMNCTMTLPRKVITAATVG
SLVCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPV
EDFPTENPNESSSLSLRGFLQLLRQDTSNSPRRRRRPRFIRRAVRRMRRWGLIPRSASRP
SQPSSSAPQLTEAPSTDVDPSQSTPATTSLAVEAVNLPLPQKLGLLPQTVQYQPPPPPHF
LPPPTLLPPPIVSTPATPQSPPVAVPPTPSSPSLASLFHSLGRTISRFRSSPSSSSPTNS
LPLSTSPSFSSSSLEDEVLLIPLSEDTTPEDDVPLLTLDP
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctttcaacctttgtgtcctcaacgttttgtttgtaactgcctacagcagc
ctggagctggcctccagtactgctcattgtggacaatctccccaagttctggaagccccg
aggggagagatcagaagctccgtccaccacagctggtcctaccgcccacggccgttcaac
tgtagttggattatcaaggcacacgtaggagagcccgttatcctcagtttctcccagttt
tctacacgctgtaagaaggaatgggtctcggtgacatcatcaactggcaagcccattacc
ttttgtggttccgacctgccaaagcccatggagttgatgggggggaacattacagtgacg
caccacttcctgccacacttatttcccgtctctgcgttctgcctgggctacgtcagagac
tctggtgaatgtccggtggtggactttgagtgtttgggcgggcgctgcctgcccctgtcc
tggcgttgtaacggccagacagagtgtctgggtgaagggatggggctgggaacagacgag
caggaatgtgacggagagatcgagatccaggatcctgagcacgacaaagtagtggtaacc
accaccacaccagagtcctacatagagagagagagggagggggagacaggaagagagaag
agcggggggagggattgggaaactgcaccggttgaggtggagaaagaggagaaggaagta
gaggaggatggggactacaccaaggtaaaggagccagataatcctatggaggactactgg
gagttcctgcctcgtcaactccccagcccccagcctcacagagcccaccccagtcccggt
atgacccaggcccccatcgagtggccgtgtggcggcctcctccaaaccttctatgggacg
ttcgcccctccttccatcaagggcccccctctgttctgtgtgtggaccctggacccccag
gactccaggcctctgaagctggacctgcagctgctggaactggggcctggagacacggtc
actatcaccaacagacagcagggcaccggggaactcatcaaaactatcaccagcgagtcc
agctacaaggccatccaggttgagtcccggaccggccttctctccctgacctatcacacg
cttcccggctcggaggggctgggcttcaacgccacctaccgtgtcgggggctactgcccc
ccctgggagggtaaatgtgggggtgccgcggggggctgctacacccaggaacagaagtgt
gacgggcgctgggactgtcctgagacagggcatgatgaggcgggatgcagggggtgtccc
agggaccagtttgcttgcggaggggtggggcagcgggcggtgctggcgggtcataacttc
atcgggcgtccggtgtgcttccctgccaaggagaggtgtaactaccagctgtactgtgct
gacgggagcgacgaaaaagactgtaccatatgtcaacctgggaccttccactgcgacagc
aacaggtgtgtgtttgagagctggagttgtgacggccaggtggactgtaaggacgggaca
gacgagatgaactgcaccatgaccctgcctcgaaaggtcatcaccgcggcaaccgtgggc
agcctggtctgtgggctgctgctggtcatcgctatgggctgcacctgcaagctctactca
ctgcggacccgagaatacagtatgtttgccccaatcagccgccaggaggcggagctaatc
cagcagcaggcccctccctcctatggtcaattgatcgcccagggcatcatccctccagtg
gaggacttccccacggagaaccccaatgagtcttcctctctttctctgagaggttttctc
cagcttctcagacaggatacttctaactctccacgacgccgacgccgtccccgattcatc
cgccgggctgtccgtcgcatgcggagatggggcctaatccccagatccgcctccaggccc
tcccagccatccagctctgccccccagctgacagaggccccctccactgatgtggatccc
agtcaatcaactcccgccaccacctcattggctgtggaagccgtcaatctgccattgcca
cagaaactaggcttgctcccacagacagtgcagtaccagccaccaccacccccccacttc
cttcctccacccactctactccctccacccattgtctctactccagctaccccccagagc
cctccagtggctgtcccccccacccccagcagcccctccctagcctctctcttccactct
ttggggcgcactatctctcgcttccgctcctccccttcctcctcctcccccaccaactca
ctgcccctctccacatccccctctttctcttcctcctctttggaggacgaggtgctactt
atccccctctccgaggacacaaccccagaggacgacgtgcccctgcttacactcgacccc
tga
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