Oncorhynchus nerka (sockeye salmon): 115137995
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Entry
115137995 CDS
T07952
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115137995
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115137995
Surveillance factors
Other surveillance factors
115137995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
115137995
NCBI-ProteinID:
XP_029530227
LinkDB
All DBs
Position
LG12:complement(4965573..5005039)
Genome browser
AA seq
1104 aa
AA seq
DB search
MRVCTRVCRCDQACMLCVSWCVTDRCILFLHFSPDTQLCKDVRNMTAETLNFGPEWLRAL
SSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDMQDKEFASILQDEPMQP
LALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGTTRGGGRGRGRGESGGF
YQRSIEEGEVGFGRGAREIHRSQSWDDRGERRFEKPVRAREGVRVGFEEATGVPVPGVPR
KDYTRSDSENWRSLREEQEEEEEEGADPGGSWRLAGARRLDDGGPKSAGWREHDGQVEGR
RRKFEFDFGGGRRRAGSEGLEDDRDGLPEWCTDEEGEMGTFDASGAFLPISKGGKEDELD
FQGIEEEEEGGESLSDMKRIMNGGQRVDGKESAGTSPSSTSSSSPPGPLSAPPALALNPP
MPQLSLTVAELEASQMANSHPVPVPVLVKASKMPSEVLEGSPPGSSTTQQSPSTTSSLPS
PPPSSAANHLSLLPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEESFTQTLQESRNTAS
ALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVI
KMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGSAGSMDQDRLKKQQEQAAAVLYQQLQQ
QQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGGEASLWDLTMNSSTQG
PTLEQLQKLQQERREAELRVKREEEEQRKRREEKRRQQEEQKRREEEEIFRRKQCRQQQE
LIMKLLQQAPQQGSGSGVGSGWGTGGLNKSGAKGLSLLDMQEAERLLKQQQRAQQQQRER
HQGLSMGGSSMGQWGDGGAVTGSLWGGGGGMEGKAGGGMGLWDEAVKNQTRSSSMQGLKN
SRSSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQMLHALNTQANNTSS
PLDVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERRAKQKQNLQRQQQQLS
KEVAGLAMSNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQGAMKKKKQPVVLHSDPS
ILGYSYHNTGERLSLNEMEMVEDY
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtgcacacgtgtttgtcggtgcgaccaagcatgcatgctgtgtgttagttgg
tgtgtcactgacagatgcattcttttcttgcacttttctccagatactcagctctgtaaa
gacgtaaggaatatgactgctgagacacttaacttcggccccgaatggctccgtgcacta
tccagtggggggagtgtgacgtccccccctccttcccccgccatgccaaagtacaagctg
gccgagtatcgctacggccgagaggagatgttagcactttatatcaaagagaacaaggcc
ccggaggacatgcaggataaggagtttgcgtctattctgcaagatgagcccatgcagccg
ctggcactggagcctctcactgaggaggagcagaggaacttctcaatgtctgtgaacagt
gtggctgtgctgaggctcatgggtaaaggagggggagttgccccagcgggcgtggcccga
ggcagaggaaccacgcgaggaggaggcagagggcgaggtcgaggcgagagtggaggattc
taccaaagaagtattgaggagggagaggtaggcttcggccgtggagccagagagatccac
cgcagccagagctgggacgacaggggcgagaggcgttttgagaagcctgtgcgtgccagg
gagggggtacgtgttggcttcgaggaggcgaccggtgtccctgtgcctggggtaccgagg
aaggactacacgcggtcggacagtgagaactggcgtagcctccgagaggagcaggaggag
gaggaggaggagggggccgaccccgggggcagctggagactggccggagcacggagatta
gatgatggcggtccaaagtcagcaggctggcgggagcacgacggtcaggttgaggggcgt
cgcaggaagtttgagtttgacttcggcgggggtcgcaggcgggccggcagcgaggggtta
gaggacgacagagacggactgcctgagtggtgcactgatgaagaaggagagatgggcacc
ttcgacgcttccggagccttcctacccatatccaagggaggaaaggaggatgaattggac
ttccagggaatagaagaggaggaagaagggggggagagtctttctgacatgaagaggatc
atgaatggaggacagagagttgatggaaaggaatccgctggtaccagtccctcttctacc
tcctcctcctctccccctggccccctctctgcccctccagctctggctctcaaccccccc
atgccccagctgtccctcaccgtggctgagctggaggcctctcagatggccaacagccac
cctgtccctgttcctgtccttgtcaaggccagcaagatgccaagtgaagttctcgagggc
tctccaccagggtcctccaccacccaacagagccccagcaccacctccagtctgccttca
ccccctccctcctctgctgctaaccatctctccctgctaccggggggcgacaccgaggac
gacgagggcatgaagcacctgcaacaggaggcagagaagatggtggcgtccctgcaggac
acgtctctggaggaggagagtttcactcagacgctgcaggagagcagaaacacagcctcc
gccctgcccctctcccacgacgctgccatgaagtggttctataaggacccccaggcagag
atccagggtccattcaccactctggagatgtgcgagtggttccaggcgggttacttctcc
atgtctctgctggtgaagaggggctgtgacgagggcttccagccgctgggtgacgtcatc
aagatgtggggacgcgtgcctttcgcccctgggccctccccgccgcccctgctggtgaga
cctccaccgccacgccctcagcctctaccgccccgggggtctgctggtagcatggatcag
gaccgtctgaagaagcagcaggagcaggcagcagcagttctctatcaacagctccagcag
cagcagcagctattccagctcatcagcaggtgcggagagcagggtattttgccttcggtg
aacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagcaatcaggcggtgaagccagtttatgggacttaacaatgaattcttcaactcagggt
ccaactctcgaacagcttcagaagctccagcaggagaggagagaagctgaactcagggta
aagcgcgaggaggaggaacagcgcaagaggagggaagagaagaggaggcagcaggaggag
cagaagaggagggaggaggaggagatcttcagacgcaaacagtgtcgccagcagcaggag
ctgatcatgaagctgctccagcaggccccccagcagggctcaggctccggggtgggatct
ggctggggcactgggggtctcaacaagtcaggggccaagggcctcagtctgcttgacatg
caggaggcagagaggcttcttaaacagcagcagagagcccagcagcagcagagagaacgt
caccaaggcctgtcaatggggggttcctccatgggtcagtggggggacggaggtgctgtc
acgggcagcctgtggggaggcggaggggggatggagggtaaggctgggggcggcatgggt
ctgtgggatgaggcagtgaagaaccagaccagaagtagcagcatgcagggactgaagaac
agccgcagcagcccttcactcagtgagcagtatatgctgagctgtaggaagcagcgtacg
gatgaggaggacaagctgctgaagctgctgcagggcatcaagacgcctcaggacgggttc
accacctggtgtgaacagatgctgcacgccctcaacacccaagccaacaacacctcctct
ccactggacgtgtccaccatcgtggcgtacctgaaggaggtggagtctccctacgaggtc
cacgactttatccgctcctacctgggagacaccatggaagccaaagagttcgccaagcac
ttcctggagcgacgtgccaaacagaaacagaacctgcagcggcagcagcagcagctatca
aaggaagtagcagggctggccatgagcaacttccctctgccggactccatgcggggagtg
agccccagcaccctgcagtccatgttccaggccgcccagatggggaagggagggctgtac
gacacccagggggccatgaagaagaagaaacagcctgtggtgctgcactctgaccccagc
atcttagggtactcataccacaacacgggtgagcgtctgagcctgaatgagatggagatg
gtggaggattactga
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