Oncorhynchus nerka (sockeye salmon): 115138011
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Entry
115138011 CDS
T07952
Name
(RefSeq) RNA-binding protein 4B-like isoform X1
KO
K13187
RNA-binding protein 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115138011
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115138011
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
RRM_7
Calcipressin
Motif
Other DBs
NCBI-GeneID:
115138011
NCBI-ProteinID:
XP_029530259
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Position
LG12:5678779..5699217
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AA seq
347 aa
AA seq
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MVKIFIGNVPREADKDEIQALFSQYGAVTECAIVKNFAFVHMDDRKSATKAIRSLHLYKL
HGTAINVEASRGKNQGAVKLHVTNVEKGNDDELRTLFEEYGTVSECAIVKNFAFVHMDNS
DEALDAIKGLDNVEFQGKRIHVQISKSRPRYEEEEDYPPPQRGGYRPPRGYPGERHDPPP
PSYLRGRHPPPHHGYPAPPPPPPPPRRAPYPERAYERERESYAVVDYYEKYRARPAAYGI
MSYDERRVGSLPPPPPPPSSMVRERFMASGLDPYERRPLPPPPSAYYTRDRSPIRRAPPP
PMPPAGNGYSYERSRLSPVSRPAMYNLPRTRDPYADRLPPPPPARYY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatcttcattgggaatgtccctcgggaggcagacaaggatgaaatccaggca
ctcttctcacagtacggtgccgtcacagaatgtgccatcgtcaagaattttgctttcgtc
cacatggatgaccgtaagtctgccaccaaagccatccgcagcctgcacctctacaagttg
catggcacggcaataaatgtcgaggctagtcgcgggaagaaccagggagccgtcaaactc
cacgtgacaaacgtggagaaaggcaacgatgatgagctccgcactttgttcgaggagtac
ggcacagtctctgaatgtgctattgtcaaaaacttcgcgtttgtgcacatggacaactcc
gacgaggctttggatgccatcaagggattagacaacgttgaattccaggggaaacgtatc
catgttcagatatcaaagagccgtcccaggtatgaggaggaagaagactaccccccacct
caaagggggggatacaggcccccccgtggctaccccggggagaggcatgatcctccaccc
cctagctatctaagaggtcgtcacccaccccctcatcacgggtaccctgccccccctcca
ccaccccctccccctagacgagccccgtaccctgagcgtgcttatgagcgcgagagggag
agctatgccgtggtggattactatgagaaatacagggctcgtcctgccgcttatggcata
atgtcctatgatgagaggcgtgtaggctccttaccccctcctcccccgcccccctcttcc
atggtcagggagcgtttcatggcctctggcctcgatccatatgagcgtcgccccctccct
cctcccccgtctgcatactacaccagggaccgcagtcccattcggagggcccctcctccc
cccatgccccccgccggtaacggttactcctatgagcgttcccgactctcccccgtctct
cggcccgcgatgtacaacctaccacgtaccagagacccctacgccgacaggttgccgccg
ccgccaccggcccgctattactaa
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