Oncorhynchus nerka (sockeye salmon): 115138049
Help
Entry
115138049 CDS
T07952
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein-like
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115138049
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
115138049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
115138049
NCBI-ProteinID:
XP_029530299
LinkDB
All DBs
Position
LG12:complement(6527805..6557435)
Genome browser
AA seq
1037 aa
AA seq
DB search
MVHVYNCHPFESQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVAICAGYIALQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVPQDMI
TGAEQDNETEGRREGLAGHRDHDDFFIFPKHQELLGDRAKDCGVKISLEWTGMESEARGN
LIITYILYRRFAPDFFQDCSVEETHLHSLQFHPVFTSESEPHYTVPSQEPDCVFVFFSLP
KTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAARAEDPY
IDTTMKACPPITMELCALRIQLFIGLKALCHYRHHIVLLTTADVETREDIERTARRVMNR
KSPFTKPQNPSEMGHGWNLYVVNTVPPLQLYNEMVEYSKTYEETNPLSHSRLHLLSEAHL
LLRATLLDPRVGNPVERPQTTGQNLAQALGYNTTHTADRQELQQAFQESCAQLGDCFSRF
DKRDCHLALPYYKMSGLSLTEVISRNRGLSNSLCGYGKGFLFFLKHSLYEETLELLTEET
ANEVLDIFGVAEPSQLPHVIASPSMARASPDCGLAHLERLESIGAPSVPLTLSKAALALR
MADLQLYRQHMDRHTEMLQVYGFIEEAKLLLHGRGDTVVPTLLARHLRDNQDGLLVAAMV
ALHENDKVKLDEADLFFQELCGDVSGPQGGPQLLVDFWEALLMASSQEAVIQELLFRLTT
VYIDRVTRRDGRGFKPLKSADDLINWCSHYGVLYPWVSILTPAHVNIIPEDLHKLQSLLC
GPTLDVSSILPLLEQLPDEDNAGLSVHVLCATKLGHYESSIERLLDRCPQAIIPYANHEL
QNNSMALWWQKLFPELCERTRATQGENTILLAALKETLVVVAMELNPLEFLDLLPDDGTV
HFFLPHLLECSQRNLMM
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccccttcgagtcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggagaagaggggtgtcctctcatctgccgcttcgccact
atggggactgtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctacgtgcctacaccaactggcgctaccaggcggctgag
aagacccgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcctgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctg
atcatccatctcccgggactgtcgccccaacaggtggcgatctgtgcagggtacattgcc
ctgcagacagagctggaggtgctggtggtcaaactagagagacttcctggtgctgctttc
acccagaagtcagctgacaagaagccccaggaccacagtctggtcccccaagatatgatc
actggagcagaacaagacaacgagactgaggggagaagagagggtctggctggtcaccgt
gaccatgatgacttcttcattttccccaagcaccaagagctcctgggggacagggctaag
gactgtggggtcaagatctctctggagtggacaggcatggagagtgaggccaggggcaac
ctcatcatcacctatatcttatacaggcgttttgctccagacttcttccaggactgtagt
gttgaggagacccacctccactccctgcagtttcacccagtgttcaccagtgagtcagaa
cctcattacactgtcccatcccaagaaccggactgtgtttttgttttcttctcgctgccc
aagacgggctatttgtacagcgtgaggggcggggttcagatggtctcagcctatcagtat
ccagagaaggcccagcaggccgtcctcactgacctcttcctccacatcatcacaaagaat
gctctccagtgcttctcagtgaggtgtgcagcagtggcagccagagctgaggacccttac
atcgataccactatgaaggcctgtcctcccatcaccatggagttgtgtgctctgcgtatt
cagctgttcattggtctgaaggctttgtgtcactaccgacaccacatcgtcctgctgacc
actgcagatgtggagaccagggaggacatagagaggaccgcacgcagagtcatgaacagg
aagtcacccttcaccaagccccagaatcccagtgagatgggtcacggctggaacctgtac
gtggtcaacaccgtccccccgctccagctctacaacgagatggtggagtacagtaagacg
tatgaggagaccaaccctctgtctcacagccgtctgcacctgctcagtgaagcccacctc
ctcctgagagccacgctcctggacccccgggttggaaaccctgtagaacggcctcagacc
actggtcagaacctagcccaggccctgggatataatacaacccacaccgcagacagacag
gagctgcagcaggccttccaggagagctgcgcccagttaggagactgcttcagcaggttt
gataagcgggactgccacctggccctgccctactataagatgtcaggcctgtctctgaca
gaggtgatctccaggaacaggggtctgtctaacagcctctgtggctacgggaagggcttc
ctcttcttcctcaaacactccctctatgaggagaccctggagctgctcactgaggagacg
gccaacgaggtgctggatatcttcggtgtggccgagccgtcccagcttccccatgttata
gccagcccttccatggccagagccagccctgactgtggcctggcccacctagagcggctg
gagtccatcggagccccctccgtacccctcaccctgtccaaggctgccctggccctgcgc
atggcagacctgcagctctacaggcaacacatggaccgacacacagagatgctgcaggtg
tatgggttcattgaggaagccaagctgctgctgcacggcagaggggatacggtggtacct
actctcctggctcgtcacctcagggacaaccaggacggcctgctggtggcagccatggtg
gcgctgcacgagaacgacaaggtcaaactggacgaggctgacctcttcttccaggagctg
tgtggggatgtgtcagggccccagggaggccctcagctgctggttgacttctgggaagcc
ttgctgatggcctcgtcacaggaagctgtcatccaggagctgctgttccgcctcaccact
gtctacatcgatcgcgtcacacgccgagacggccgcggattcaaaccgctcaagagcgca
gacgacctgattaactggtgttctcactatggcgtgttgtacccctgggtcagcatcctg
actccagctcacgtcaacatcattccagaggacctccacaaactacagtccctgctgtgc
ggtcccaccctggacgtgtcatccatcctgcccctgttggagcagctgcctgacgaggac
aacgccgggctcagtgtgcacgtgctctgtgccaccaagctgggtcactacgagagctcc
atcgagaggttgctagaccgctgtcctcaggccatcatcccttatgctaatcatgagcta
cagaacaacagcatggctctgtggtggcagaagctgttccccgagctgtgtgagagaacc
agagcaacacagggagagaacactatcctgctggctgcactcaaagaaacgctggtggtg
gttgccatggagctgaaccccctggagttcctggacctgttgcctgacgacgggacggtc
cacttcttcctgcctcacctgctggagtgcagccagagaaacctcatgatgtga
DBGET
integrated database retrieval system
