Oncorhynchus nerka (sockeye salmon): 115138058
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Entry
115138058 CDS
T07952
Name
(RefSeq) netrin-1-like
KO
K06843
netrin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115138058
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Axon guidance molecules
115138058
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
115138058
NCBI-ProteinID:
XP_029530316
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Position
LG12:6865061..6888533
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AA seq
856 aa
AA seq
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MMFLPFSPLPSLALPFLLLLLIFLPPSLLSPSLSHSPLSWTSPHDPCYHLDGRPRHCLSE
FINAAHGVPVSTAHSLRGPPDQKAVNVSALTDLHNPHNLTCWTAQPGGLDGGDWVLTLPL
GRRFEVTYISLQFCQQGEPSDPVSLSVLKSMDHGRTWRPMQHYSSDCPGKFGLQAQTVAQ
TRHQETEPLCSDPRPLQRHRGGMLLAFSTLDGRPSSPDFDYSPTLQDWVTATDIRLVFHE
VIQSQQTKVGSSEGKGGEGAGGGVLRWRAGSKYEAVVGQVNKVNGDNNKWGFVEKEKKKT
EKRRRNGGGYNKGSGDRGEDGHNVTRKESEGDTMEIDISKRGNGNGKGHGRERERGHHWS
PCQEGSICGWTIDSKQGRINKGRELRRRRNNQQKVRANRNLELAPPSPLISTSPVRPALA
LSDLQVGGRCKCNGHASRCRRDDAGRAVCVCEHHTAGTDCDVCEDFYYDRPWQRATPSQP
QQCVSCECNSHSSKCRFSMEVFQQSGRHSGGVCLKCRHHTAGRHCQSCQNGYTRDHSKPP
THRKTCQPCQCHPMGAVGLWCNQTSGQCLCRDGVMGLRCNRCAPGYKQGHSPLRPCVRIQ
EVAPTTPVYQPQYSIAEECLSYCLPSQVKVRMNLETYCLKDYVLKLQVRGMERSGPWWQF
SIWIQTVFRTGSSSSVRRGPQALWVPDRDLGCGCPALQVGRTFLLIGAEEGGRGPEERRL
VADRSTLALQWREHWNPKLRGFRGQDKRGRCPTGGDPHMGHLKHHHSEYTPPHLVVEKET
AVEVHPEHTNPHTHSHPHTPSDSMKDMEEEAEHSVALDTHTHTQSSSHHRPETPQEQQQE
QTPSPSTPIIICSTPV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctgcccttctcccctctcccctccttggccctcccttttctcctacttctc
ctaattttcctccctccttccctcctttccccttccctctctcactcccctctgagctgg
acctcaccccatgacccctgctaccacttggatgggcgtccgcgacactgcctgtcggaa
ttcatcaatgccgctcacggtgtccctgtcagtaccgcccactccctccgaggacccccc
gaccagaaagctgttaacgtcagcgccctcacggacctccacaacccacacaacttgacc
tgctggacggcccagcccggaggcctcgacggcggggactgggtcctcacccttcccctg
ggccgacgcttcgaggtcacctacatcagcctgcagttttgccagcagggggagccgtca
gaccccgtctccttatccgtgctcaagtccatggaccacgggcgcacctggaggcccatg
cagcactactccagcgactgccccgggaagtttgggctccaggcccagacggtggcccag
accaggcaccaggagacagagcctctgtgctcagacccccggcccctgcagaggcaccgg
ggaggcatgttgctggccttctccaccctagatggaagaccctcctctcctgactttgac
tacagccccaccctgcaggactgggtgacggccacggacatacggttagtgttccacgag
gtgatccagtcccagcagaccaaggtggggagttcggaggggaaagggggggagggagcg
ggtgggggtgttctgaggtggagggcagggtcaaagtacgaggctgtggtgggacaggtg
aataaggtgaatggggacaacaataaatgggggtttgtggagaaggagaaaaaaaagaca
gaaaaacgaaggaggaacggaggaggatacaacaaagggtcgggggatcggggagaggac
ggacacaacgtgacccggaaggagtcagaaggagacactatggaaatagacatctccaaa
agaggaaacggaaacggaaaagggcatggccgcgagagggagaggggccaccattggagt
ccgtgtcaggaaggcagcatctgtggttggacaatcgacagcaagcaggggagaatcaac
aaggggcgggaacttcggaggaggaggaacaaccagcagaaagtgagagccaatcggaat
cttgagctggctcctccctctccattgatctccacctcccctgtccggcccgccctggcc
ctctccgacctgcaggtggggggcaggtgtaagtgtaacggacatgcctctcggtgtcgt
cgtgatgatgcgggccgggcggtgtgtgtgtgtgagcaccacacagcagggacggactgc
gatgtttgtgaggacttctactacgacaggccctggcaacgagccacgcccagtcagcca
caacagtgcgtctcgtgtgagtgtaacagccactcctctaagtgtcggttcagcatggag
gtgttccagcagtcgggccggcacagcgggggagtatgtctgaagtgtcggcatcacaca
gcggggcgccactgccagtcctgccagaacggatacacccgagaccacagcaagcccccc
acccatcgcaagacctgccaaccgtgtcagtgtcaccctatgggtgctgtgggtctctgg
tgtaaccagacatcgggacagtgtctgtgtcgggatggcgtgatgggactgagatgcaac
cgctgcgcccctggttacaaacaggggcactccccactccgcccctgcgtccgaatccag
gaggtagcccccacaacacctgtataccagccccagtacagtatagctgaagagtgttta
tcgtactgcctgccatcgcaggttaaagtgaggatgaacctggagacgtactgtctaaag
gactatgtcctgaagctgcaggtcagagggatggagcgttcgggcccttggtggcagttt
tctatctggattcagactgtgttccgtacagggtcttcatccagcgtgcgtaggggcccg
caggccctgtgggttcccgaccgcgacctgggctgtggctgccccgccctccaggtgggc
cgcaccttcctgctgattggggccgaggaggggggccggggcccagaggagagacgactg
gtggccgatagatccacactggccctccagtggagggagcactggaaccccaaactgaga
gggttcagggggcaggacaagaggggccgctgccccacaggtggggacccccacatgggc
cacttgaagcaccatcactcagagtatacaccacctcacctagtggttgagaaagagaca
gcggttgaggtgcaccctgaacatacaaacccacacacacattcacatccacacacaccc
tcagattccatgaaagacatggaagaggaggcagagcactctgtggcgctggacacacac
actcacacacagtcctcctcgcatcacagacctgagaccccacaggaacagcaacaggaa
cagactccgtctccctccacgcccattatcatatgttccacccctgtctga
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