Oncorhynchus nerka (sockeye salmon): 115138067
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Entry
115138067 CDS
T07952
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115138067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115138067
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115138067
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115138067
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115138067
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115138067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BAR
PH_8
PH_21
PH_11
BAR_2
PH_17
SirA
Motif
Other DBs
NCBI-GeneID:
115138067
NCBI-ProteinID:
XP_029530327
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All DBs
Position
LG12:7127357..7165763
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AA seq
766 aa
AA seq
DB search
MTVKLDFEECLKDSPRFRADIEVVEGDVSELETRLEKLVKQCHSMLEAGRAYCQTSKSFV
TGLKELGHHCSGDNMMGECLEKFSQKLEVILEAQGEVIETTQKSVKLKLQSFVKEDVRRF
KDVRKEFERGSESLEAALGRNAQAPRGKQHEVEEASHALLNARKTFRSGALDYVLQINVI
EAKKKTDILMAMVSMMEAQSQFFQQGHQSLSELADYRRTLSEEHTQLVLNSAREKRDMEQ
RHAAIKKKDVSYDNSLMDFCADAPNGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKEQPTVVMEDLRLCTVKVCADNERRFCFEVVSPSKSCLLQADSERQQQGWISAVQNSI
ASAFQERREDPHSPRERCSSVSGSPGGGVFGDQEKTGGREALDQVQGIPGNRQCCDCGEP
GPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELVRLMCELGNTAINRIYE
ARIDEITIKKPHPSSPRGDKESWIRSKFVEKKFIQKLPETGRNIPLRRSSARRNRANTQE
RPAGSRPPLKPKPNRATLPRLPGLNQSDLLQKNNTGIHKDGEDDDEEEDLSGLHPGALLY
RSAALQHFPVMADALAHGADVNWVNTVEESSTPLIQAVTANSLAACEFLLQNGANVNTAD
SNGRGPLHHATILGHTGLVCLFLKRGADYNARDHTQKDPITIAVETANADIVTLLRIAKM
NKEMREMDGAFGQPGDETYQDIFRDFSHMASNNPEKLKRRSTDFKT
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaactggactttgaagagtgtctcaaagactcccccagattcagggctgac
attgaagtggtggaaggagatgtcagtgaattggagacgcgattagaaaagctggtgaag
cagtgccactccatgctggaggctggcagggcctactgtcagaccagcaagagctttgtc
acagggctcaaagagctgggccaccactgttctggggacaacatgatgggggagtgtttg
gagaaattctcccagaagctggaagtgattctggaagctcagggggaagtgattgagacc
acacagaagtcggtgaagttgaaactgcagagttttgtgaaagaggacgtgcgtcggttc
aaggatgtgcgtaaggagtttgagcggggcagtgagagtctggaggcggcgttgggcagg
aacgctcaggccccccgggggaagcagcacgaggtggaggaagccagccatgccctcctc
aatgcccgcaagacctttcgttccggggccctcgactacgtactgcagatcaatgtcatc
gaggccaagaagaagaccgacattctgatggcgatggtgtctatgatggaagcccagtcc
cagttcttccaacaaggtcaccagtccctctctgagctggccgactatcgacgcaccctg
agtgaagagcacactcaactagtgttgaattccgcaagggagaagagagacatggaacag
agacacgctgccattaagaaaaaggatgtctcgtatgataactccttaatggatttctgt
gctgatgcacccaacggtatcgccatggagggctacctgtataagagagctagcaatgcc
ttcaagacctggagcaggcgctggttctctatccagaaaaatcaactggtctatcagaag
aaattcaaggagcagcccaccgtggtgatggaggacctgcgtctgtgcacagtgaaggtc
tgcgctgacaacgagagacgattctgctttgaggtggtctcaccgtccaagagctgtctg
ttacaggcggactcagagcgtcagcaacagggctggatcagtgctgtccagaacagcata
gcctcagccttccaggaacgcagagaagacccacacagcccaagggagcgttgcagctca
gtgtcgggcagcccaggaggaggggtgtttggggatcaggagaagacggggggccgcgag
gctctggatcaggtccagggcatcccgggaaacaggcagtgctgcgactgtggagaacct
ggtccggactgggcctctattaacctggggatcaccctctgtatcgtctgttctgggata
cacaggagtctgggtgtccacttctccaaagtacgctccctcaccctggactcctgggaa
ccagagctggtcaggttgatgtgtgagttgggcaacacagccatcaataggatctacgag
gcgcggattgatgagatcaccatcaagaaaccccacccgtccagtccaaggggtgataag
gagtcgtggattcgttctaagtttgtggagaagaagtttatccagaagctcccggagacg
ggtcggaacattccactgcggcgctccagcgcccggaggaaccgagcaaacacccaggag
aggccagccggctcacgaccaccactcaaacccaaacccaatcgggccaccctgccacga
ctcccagggctcaaccagagtgatcttcttcaaaagaacaatacaggcattcacaaagat
ggtgaagatgatgatgaagaggaggacctgtctggtcttcatcccggggcattgttatat
cggtctgcagcgctgcagcatttccctgtcatggccgacgccctggcccacggagctgac
gtcaactgggtcaacacagtcgaggagtccagcaccccactcatacaagccgtcaccgcg
aactccttggcagcgtgtgagttcctgctacagaacggtgccaatgtcaacacagcagac
agcaatgggagaggacccctacaccacgccactatactgggacacactgggctggtgtgt
ctgttcctgaagagaggggcggactacaacgccagagaccacacccagaaagatcccatc
accattgccgtggagaccgccaacgctgacatcgtcaccctgctgcgaatcgccaagatg
aacaaggagatgcgggagatggacggagcctttggccaaccaggtgatgaaacgtaccag
gacatcttcagggacttctctcacatggcctctaacaacccagagaagctgaaacggcgc
agcacagattttaagacttga
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