Oncorhynchus nerka (sockeye salmon): 115138072
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Entry
115138072 CDS
T07952
Name
(RefSeq) thyroid receptor-interacting protein 6-like
KO
K12792
thyroid receptor-interacting protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115138072
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
115138072
NCBI-ProteinID:
XP_029530336
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Position
LG12:7261033..7270360
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AA seq
573 aa
AA seq
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MSGPTWLPPRTLGSPERTVHQMSHSGPAMYRQPPMKVSSDPRPKYGVYDQKGGGGGLATR
YMATGPTGGPMQHQEDTGFHPKSNDHYYQPPPHGLKEDRSWNPHMDSYELMHRGPEKPSG
HHSNLDAEIDSLTCMLADLDSHPQNSTQLYDNVPYNKHISGDHYKPSTQPGALSQGRPSM
GYPTQSQYHPAPPYPSDPHQVPQYSPQPDYTYAQVSKPYPQPVPASYTTSSTPTGPRFSV
QVKTAQPVTYSQTGRQAEQAYTPPPPHQHSSRPPPQNQTGPQGWYPPHPASQAQELHSDG
GYKEIPGGSRGRGNQGPTPKRGLENHQPGSREAPSPAYQPSKGSAAPRQEEELDRLTKKL
VYDMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYALD
KKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDATS
QIHCIDDFHRKFAPRCSVCGQAIMPEPGQEETVRIVALDRSFHVNCYVCEECGLLLSSEG
EGRGCYPLDGHILCKGCSARRIQDLSAKISTDC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcccacctggctgccgccaaggactctgggtagcccagagagaactgttcat
cagatgtcccactccgggccagccatgtacagacagccgcccatgaaggtctcctcggac
ccccggcccaagtatggggtctatgaccagaaaggaggtggaggaggactggccactagg
tacatggctactggacccacaggtggacccatgcagcaccaagaggacacagggtttcac
cctaaatctaacgaccactactaccaaccacctccccacgggctcaaagaagaccggtcc
tggaaccctcacatggacagctatgagctaatgcatcgtggacctgagaagccaagtgga
caccactccaacctcgatgcagagattgactctctcacctgcatgctggccgatctggac
agccatccacagaacagcacacagctgtacgataacgtgccttacaacaaacacatctca
ggggaccactacaaaccctcaacccagccaggagcactctctcagggcaggccgtccatg
ggttaccccacccagtctcagtaccatccagcacccccttaccccagtgatccccaccag
gttccccagtactccccccagccagactacacctacgcccaggtgtccaaaccctaccct
cagcctgtccctgcctcctataccacctcttccacccctactggcccgaggttcagcgtc
caggtaaaaacagcccagcctgtcacctactcccaaactggtagacaagccgagcaggct
tacacccctcctccgccccaccagcactcctcgcgccccccaccccagaaccagacgggc
ccccagggctggtaccctccccatcccgcatcccaagcccaggagctgcactctgatggg
ggctacaaggagatccccggggggtctagagggcgagggaaccagggccccacgcccaag
agaggcctggagaatcaccaaccagggtcaagagaggccccaagtcctgcctatcagccc
agcaaggggtcagcagctccgaggcaagaggaggaattggaccggctcactaagaagttg
gtgtatgacatgaatcacccacctacagaggaatactttggtcgctgtgcgcgttgcggt
gacaatgtgcttggcgatggcagtggctgtatcgccatggagcaggtgttccacgtggag
tgtttcacctgcatcacctgccacgcccgtctccgggggcaacccttctacgccctggac
aagaagagctactgcgaaagctgttacattagtaccctagagcgctgctctaagtgctcc
aaacccatcttggaccgtatcctgcgggccatgggaaaggcctaccacccgcgctgcttc
aactgtgtggtgtgtggctgctgcctggacggggttcccttcactgtggacgccacctcc
cagattcactgcatagatgacttccacaggaagtttgccccacgctgctcagtgtgtggc
caggctatcatgcccgaaccgggacaggaggagaccgtcaggatagtggcgctggaccgc
agcttccacgtcaactgctacgtgtgtgaggagtgtggtctgctcctgtcctccgagggt
gaggggcgaggctgttaccccctggatggtcacatcctgtgtaagggctgcagcgcccgc
cgcatccaggacctttccgccaaaatctccactgactgctaa
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