Oncorhynchus nerka (sockeye salmon): 115138079
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Entry
115138079 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta-like isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115138079
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115138079
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115138079
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115138079
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115138079
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Type II RPTP family
115138079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
PTP-SAK
V-set
Tc-R-P
fn3_2
DSPc
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
115138079
NCBI-ProteinID:
XP_029530357
LinkDB
All DBs
Position
LG12:8328097..8938848
Genome browser
AA seq
1962 aa
AA seq
DB search
MLVPSCPMMHIARPALLVLGLLLLLADAETPPKFLRTPNDQTGVQGGVASFICQATGDPR
PKIVWNKKGKKVSNQRFEVIDFDDGSGSVLRIQPLRTPRDEAIYECVASNTVGELSATTR
LTVLREDQLPPGFPTIDMGPQLKVVERTRTATMLCAASGNPDPDISWFKDFLPVNTTNNN
GRIKQLRSESFGGTPIRGALQIEQSEESDQGKYECVATNNDGTRYSAPANLYVRELREVR
RVPPRFSIPPTDNEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELT
DVRQSNNYTCVAMSTLGVIEAVAQITVKALPKPPGIPLVTERTATSITLTWDSGNPEPVS
YYIIQHKSKISEDTYKEIDGVATTRYSVGGLSPYSDYEFRVVAVNNIGRGPPSDGIEAKT
AEQAPSTAPRQVRGRMLSATTAIIHWDEPEEANGQIMGYRVYYTMDSAQHVNLWEKQIVR
GSNFLTIQGLIPNKTYYIKVLAYTSVGDGPLSADLQIIAKTGVPSQPTDFKGEAKSETSI
LLSWIAPAQTGQDNQIMGYELLYKKGDDKEEKRISFEPTTTYLLKDLKPFTTYTFQLAAR
SKHGIGAYTNEISAETPQTQPSAPPQDVKCSSPSSTNVLVSWRPPPTELQNGIITKYAIQ
YAATEGEDTTIRQISDIPPESAQYLLENMEKWTEYRVTVTAHTDVGEGPESLPQLIRTEE
DVPSGPPRKVEVEAVNSTSIKVIWRSPMPTKQHGQIRGYQVHYVRMVNGEPMGQPGIKDI
LIEDAQWEYDDSTEHEMVISELQAESTYSVAMAAYTTKGDGARSKPKLITTTGAVPEKPR
LMVSPTNMGTALLQWHPPTLTHGPLQGYRLRFGRKDIDPLTIIEFPERENHYTTKEIHKG
ASYTFRLSARNKVGFGEETVKEINTPEDVPSGFPQSIAAEGGTTTTIQVNWNPLLLAERN
GIIVKYALQHKDINSPRSPSELFITAPESTVTLNGLKADTTYDIKMCAFTSKGSGPYSPS
VQFRTQPLDQAVFAKNFHVKAAMKTSVLLTWEIPDNYNAAQPFTILYDNGQSVEVDGKLT
QKLITGLQAGTQYSFLLTNRGNSAGGLQHRVSTMTAPDILRTKPYLIGKTNLDGMVSVEL
PSVQTSEKVRGYYIVVVPLKKQRTGKYLKPWDSPDEMNLEELLKEINRTSRGLRFRRQAE
PKAYIAAYFKDLPTEFTLGDTKIYGDFENKQLANGQEYIFFVLAVLEISENTMYATSPYS
DPVVSADLDPQPIIDEEEGLIWVVGPVLAVVFIICIVIAILLYKSSKPDSITSQPIVLTG
RESTILYRKRAESEARKGSLPNSKEIPSHNPTDPVELRRMNFQTPGSGDPGYPSNLHLSS
MASHPPIPILDLADHLERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVI
AYDHSRVLLSAIDGIPGSDYINSNYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSAN
IVMMTKLEERSRVKCDQYWPTRGTETYGLIQVTLLDTVELATYCVRTFALYKNGSSEKRE
VRQFQFTAWPDHGVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMM
ERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYVFIHDALQEAVTCGTTEVPARNLYAYIQ
KLTGIEGGENVSGMELEFKRLANTKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQP
IRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMG
REKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPE
QGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVV
DIFQTVKMLRTQRPAMVQTEDQYQFCYRAGLEYLGSFDHYAT
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgccaagctgtcccatgatgcacatagctagacccgcactgctcgtcctgggt
ctgctcctccttctcgccgacgctgaaacaccaccaaagtttttgagaacccccaatgac
caaacgggcgtgcaaggaggcgtggcatcattcatctgccaagcaacgggagacccacgc
cccaagatagtttggaacaagaaggggaagaaagtcagcaaccagagatttgaggtgatt
gatttcgatgacggctctggctcagtgttgagaattcagcccttgcgtacgccccgagac
gaagccatatacgagtgtgttgcctccaacactgttggagagctgagtgctactacgaga
ctcactgttttacgtgaggaccaactgccccctggtttccccaccattgacatgggtccc
cagttgaaagtggtagagcgaactcgtacggccaccatgctctgtgccgccagcggcaac
cctgacccagacatctcctggttcaaagatttcctgcccgtcaacaccaccaacaacaat
ggacgtatcaagcagctcagatcagaatcctttggtggtacaccaataagaggggccctc
cagattgagcagagcgaagagtccgaccaggggaagtacgagtgcgtcgccaccaacaac
gatggaacccgttattctgcccccgccaatctatatgtcagagagctgcgagaagtgcgc
cgggtgcccccgcggttctccatcccgcctacggacaatgagatcatgcctggaggcagc
gtcaacatcacctgtgtggctgtgggctcccccatgccctacgtcaaatggatgctggga
gccgaagacctgacgcccgaggacgacatgcccatagggcgaaacgttttggagctcact
gacgtccgccagtctaacaactatacctgcgtagccatgtccactctcggggttattgag
gcggtggcgcagatcacggtgaaagcattgcccaagccgcccggcattcccttggtgacg
gagcgcacggccaccagcatcacgctgacatgggactcaggcaaccctgagccagtctcc
tactacatcatccagcacaagtccaagatctcagaggacacatacaaggagatcgacggc
gtggccaccactcgatacagcgtgggtggcctcagtccctactcggactacgagttccga
gtggtggcggtgaacaacatcgggcgtgggccgcccagcgatggcatcgaagccaagacg
gccgagcaggcacctagcacggcgcccaggcaggtcaggggtcgtatgctcagtgccacc
acagccatcatccactgggacgaaccagaggaggccaatgggcagattatgggctaccgt
gtgtactacaccatggactctgcccagcacgtcaacttgtgggagaagcagatagtgcgt
gggtcaaacttcctcactattcaaggcctcatccctaacaagacctattacattaaggtc
ctggcctacacgtcggtgggcgatggacctctgtctgcagatctccagatcattgccaag
acaggggtcccctctcaaccgaccgacttcaaaggggaagccaaatccgaaacaagtata
ctactatcgtggatagcccctgcacagaccggacaagacaatcaaattatgggatatgaa
cttctgtacaagaagggggacgacaaggaggagaaacgaatcagctttgaaccaaccacc
acatacctgctgaaggacttgaaacccttcactacttatactttccagctagccgcgcgc
agtaagcatggtatcggagcctacaccaacgagatctctgcagaaacccctcaaacacag
ccctcagccccacctcaggatgtgaagtgctctagccccagctccaccaatgtcctggta
agttggcggccgccccctacggagttacagaatgggatcataaccaagtatgccatccaa
tacgctgccactgaaggggaggacaccaccatccgacaaatatccgacatccctcccgaa
agcgcccagtacctcttggaaaacatggaaaaatggaccgaataccgtgtgacagtgact
gctcacacagatgtcggtgaaggacctgaaagtttaccacaacttattcgcaccgaggag
gatgttcccagcggcccacctcgtaaagtcgaggtggaggctgtcaactccacatcaatt
aaagtgatctggcgctcgccgatgcccaccaagcagcacgggcagattcgagggtaccag
gtgcactatgtcaggatggttaatggggaacccatgggacagccaggcatcaaggacatc
ttgatcgaggatgcgcagtgggaatatgatgactcaactgaacatgaaatggtcatctca
gagctgcaggctgagagcacgtactcggttgccatggcagcctacacgacaaagggagac
ggcgctcgcagcaagcccaagctgatcaccaccactggcgcagtacctgaaaaaccacga
ctcatggtcagccctaccaacatgggcactgccctcctccagtggcaccctccgacgtta
acccacggccccctgcagggctaccgccttcgctttggccgcaaagatatcgaccccctg
accatcatcgagttccctgagcgcgagaaccactacaccaccaaagagatccacaagggg
gcatcatacacattccgcttgtctgcccgcaacaaggtgggctttggcgaggagacagta
aaagagatcaacactcctgaagatgtgcctagcggcttcccacaaagcattgcggccgag
ggtggcactaccaccaccattcaggtgaattggaatcccctgttactggcggagcgcaac
ggcattatcgtgaagtacgccctgcagcacaaggacatcaatagccctcggagtccctca
gaactcttcatcaccgccccagagtccaccgtcaccctgaacggcctcaaggctgacacc
acttacgatatcaaaatgtgtgccttcaccagcaagggctccggcccctatagtcccagt
gtccagttcaggacacagcccttggatcaagcagtgtttgcaaaaaactttcatgtgaaa
gctgccatgaagacatctgtgctcctcacctgggagatcccagacaactataacgcagct
cagcccttcacaatcctctatgacaatggccagagcgtggaggtggatggcaagctcact
cagaagcttatcacgggtctgcaggccgggacgcagtactccttcctgctgaccaaccgg
ggcaacagtgccggcggtctccagcaccgcgtctccaccatgaccgccccggacatcctg
cgcaccaagccctacctgattggcaagaccaacttggatggcatggtctctgtggagctg
ccctcagtccagacttcagagaaagtcaggggatactacatagtggtggtgcctctgaag
aaacagcgcacaggaaaatatctcaaaccctgggacagtccagatgaaatgaatctagaa
gagctgctcaaagagattaaccgaacaagccgaggccttcgcttccggaggcaagctgag
cccaaagcctacatcgctgcctacttcaaagaccttcctaccgagttcactctgggagac
accaagatctatggggactttgaaaacaagcagctcgccaacggccaagagtacatcttc
tttgtgcttgctgtcctcgagatctctgaaaataccatgtatgccaccagcccctactcc
gaccctgtcgtgtcagctgaccttgacccccagccaatcattgacgaggaggagggactt
atctgggtggtgggcccagtgctcgctgtggtcttcatcatctgcatcgtcatcgccatc
ctcctgtacaagagcagcaaaccagacagcattacatcacagccaattgtactcactggc
cgggaaagcactatactgtaccggaaaagggcagaatccgaagctagaaaaggaagtctg
cccaacagtaaggagattccgtctcataaccccaccgaccctgtggagcttcgacgcatg
aacttccaaacgcctggttcaggtgaccccggttaccccagtaacctccatttgtcaagc
atggccagccacccaccgatccccatcctggacctagccgatcatctggagcgtttgaaa
gccaacgacaacctaaagttttcgcaggaatacgagtccatcgatcccgggcagcagttc
acgtgggaacactccaacctggaagtcaacaaaccaaagaacagatatgctaacgtgata
gcatacgatcactccagagtccttctatcggctattgacggtatccctggaagtgattat
atcaattccaactacatcgacggctataggaagcagaatgcatacatcgccacgcagggc
tcgctgccagagacgtttggtgacttctggaggatgatctgggaacagcggagtgccaac
atcgtcatgatgaccaagctggaggagaggtccagggtgaaatgtgaccagtactggccc
actagagggacggagacctacggcctcatccaggtgacgctgttggacacggttgagctg
gccacatactgtgtcaggacatttgcactttataaaaatggttccagtgagaagagagag
gtgaggcagttccagttcactgcctggcctgaccacggtgtacccgagcaccccactccg
ttcttggccttcctcagacgggtcaaagcctgtaaccccccagatgcagggcccatggtg
gtacactgcagtgccggggtcgggcgcacaggctgtttcatcgtaatcgacgccatgatg
gagcgcatcaagcatgagaagacggtggacatctacggccacgtgacgctgatgcgcgcc
cagcggaactacatggtgcagacagaggaccagtacgtgttcatccacgacgcgctccag
gaggccgtcacctgcggcaccaccgaagtgcctgcccgaaacctctacgcctacatccag
aagctgaccgggatcgagggtggagagaacgtctcaggcatggagctggagttcaagcgt
ttagccaacactaaagcccatacgtcgcgattcatcagtgccaatctcccctgcaacaag
ttcaagaaccgccttgtgaacataatgccatacgagtccacacgagtgtgtcttcagcca
atccgaggggtggagggctccgactacatcaatgccagtttcattgatggatacaggcaa
cagaaagcctatattgccacacaagggcctctagcagagaccacggaggacttctggagg
atgctctgggaacacaactccacaatcgtggtcatgctaacgaagctcagagaaatgggc
agggaaaaatgccaccagtattggccagcagagaggtcggccagataccagtactttgtg
gtggaccccatggctgagtacaacatgccccagtacatcctgagagagttcaaagtgact
gacgccagggacggacagtctcggacggtcaggcagtttcagtttacagactggcccgag
caaggagtgccaaaatcgggagagggcttcatcgattttatcggccaagtgcataaaaca
aaagaacagtttggtcaagatgggcctatctcagtccattgtagtgcgggcgtgggtagg
accggagtcttcatcaccctcagcatcgtattagagcggatgaggtacgagggcgtggtg
gatattttccagacggtgaaaatgctccggacacagagaccggccatggtgcagacagag
gatcaataccagttctgttacagagctggcttggaataccttgggagctttgaccactat
gctacgtaa
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