Oncorhynchus nerka (sockeye salmon): 115138096 Help Entry 115138096         CDS       T07952                                  Symbol focad Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:one03019]     115138096 (focad) Messenger RNA biogenesis [BR:one03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      115138096 (focad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 Htt_N-HEAT_1 RTP1_C1 Motif Other DBs NCBI-GeneID:  115138096 NCBI-ProteinID:  XP_029530435 LinkDB All DBs Position LG12:complement(10896173..10966499) Genome browser AA seq 1813 aa AA seqDB search MSENLKKRFDFPSPLIQAQTVRSLVAAVLKEKGQNERIGQSSTQGPAMEALWEQCCSDCA AVRSACCDAVVLLVEQAHADLHYILNSVLNLLPSARNVQGLIKVIGRLLQVQADQRDKGT PFTCPYSIRSSPHPYIIVLENRPDCWPVLLLEIDDFIQRAADRGESAYVTMLAPFLRYLY CEPQRLPEYALLRHSLLRVLLPPQPGDHNQEKKKDQETEEDPGQSPVVCHSLVRCLYELV PHMQVDSVEAVLELRGLVEAMIPALEVADWGSERAQLALQLLCACQLSLKLSGDCRPLLQ LLHQLLPTRTEEFPVEDMMVGLALLLLEASASQQTGLLTLALSLAPPECERPPWGTPVLV LPLLQVLSCSSLMEPLTDSRTHTRNQSLAQSLLQNAQRESSKPAEKVSQLALPLSPWSSE LLVATQVLRQVTGDPVAASEWLLAVTSALPLSQRVPSPLTLTVAHLVVTGQQDVCRLALK TAAAIAQADPAQVPSLLHVLLFKLGKECDPDLSHAVLYSLPNFGTHKLCLPQVLHTLQML GSAPKLRAVALRLMTALWEKQDRVYPDLQRLISQFEKSVLLGKEAQWEQILARAACVRDI CRERPYQHGGDMLAAITHTLAQCSRPDQAAPAALALQGLHELCRTEVVDVGSTWTALGPK LSCDSRPLVVKAIAELLALLPQLTVKTEEYEKLKEQVVSFLWGYALNKEPEVASCGYKAL SEFSEAAHTLLHLPEQVRPVAKLPESVEEEQVKEKDEEEEEDLSIPGPSYVKLLGLTSLS VLPAFELFLTSLVRQEMSQMPRGVYHSALKRGSLRSDQGKTVAGIPGFMLKTYEKSKQPG LKPGLAAGLLLSFDLPVQTDRDGRPINRFLLSRGRSYQQMLATLIHEVNIQPSEWHRALL LPQAWRGFMSRAYHAVLQGRRAELEMQQKQGKESPEELQYKQHCAWLWVRDQLTDVVKSA AKDSPVVQGNSILALSGLASVLAKYESNMPADTEGGLGVGPEILSTSTWLAMVLDTLLSI VSSSYKPRGQVFPWFLHRSYSGENTASAIARSCAALALSLVVPVLVAWHKDSVPQVLATL RAGLPGSPTADDSQAVQFHSGLALGMLLSCLHQERLSDVSGQKITELLMSSLDTLEACCF DSNLEYNAGCVLGLGLVLGALSGSGQTEHRARVGLTLDKLLEALQGDSSSQGRMLQEVLA YSVAGVGVAAFSGGVVDALKSEEIMSTLRSMTEESQQTPGFSLALGLVVHGLSSCGHGKA EDIQPRLLDAWIKILLAEGCPTMQRLAAVNGLVALVGSETGILQLKNESEQSSQQQSRMN EVIRAITQIITFSGAIGLQSNSACLVGHLHLAHMSTSHSRTAVPQDFSYLPEKSVIRSAV DFLTEAGKKGPEFAHPSLVKTALASLATVGGSYQYPPVNWSAILSPLMRLNFGEVVQHQC IELASNQAQSSQSASLFLGVWLSPPLVHSLSMWTRGHLYDNLSVWMKHVSEDKLQVYVET LGLQQFQQHVRPQRLAICLSLLRGLAQAMALPNPPNTVWAVLCTTIEKIFNVLPNHIQDQ EVHLYVGVSKCLSELADTEIDRIAQVTEEQMEKTSFILAHLTSQGRVPLLGLNDVIAAVL RGWSSHKVGWLLLQTFYQCRLAASPNTGVSKRMEWLLELMGLIRNVAYGVTAVKCGDTRQ ATDFLLQVFAAAVISWGDHTMPLLLGVRTQWFPWQQGSEPPGLPHALYGDAVLAEQSVSL CLLGLPHSLRQLLAKEPWREQSQKFIDWLFSITEGPETGLSETSINTAKAALLALKSSTD FKKKAVWTRAYGW NT seq 5442 nt NT seq  +upstreamnt  +downstreamnt atgagtgagaatttgaaaaagaggtttgactttcccagcccgctcatacaggcccagacg gtgaggagtctggttgcggctgtgctgaaagagaagggccagaatgagaggatcggccag tcctccacccagggcccagctatggaggccctgtgggagcagtgctgcagtgactgtgct gctgtgcgctcagcctgctgtgacgccgtggtgctcctggtagagcaggcccacgccgac ctgcactacatactcaacagcgtcctcaaccttctgccctccgccaggaatgtgcagggg ttgataaaagtgataggaaggcttctccaggtgcaagcggaccagcgagacaaaggaacg cccttcacttgtccctactccatcaggagcagcccccatccatacatcatcgtcttggag aaccgtcctgactgctggcccgttctgctgctggagattgacgacttcatccagcgggcc gctgacaggggtgagtctgcgtacgtgaccatgttggcccccttcctgcgctacctgtac tgtgagccccagcggctgccagagtacgctctgctcagacacagcctcctcagggtccta ctgcccccccagccgggggatcacaaccaagaaaagaagaaagaccaggaaactgaagag gacccgggacagagccctgtggtatgccacagcctggttcgctgtctctacgagctagtt cctcacatgcaggtggacagtgtggaggcagtgttggagctgcggggcctcgtggaggcc atgatcccggctctggaggtggccgactgggggagtgagagggcccagctggccctgcag ctgctgtgtgcctgtcagctaagtctgaagcttagcggagactgcagaccactactccaa ctactgcaccagctcctccccacccgcacagaggagttccctgtggaggacatgatggtg ggcttggctctgctccttctcgaggcctctgcgtcccagcagaccgggctgcttacactg gccctaagtctggcccccccagagtgtgagcgacccccctggggtaccccggtgctggtg ctgcctctcctgcaggtcctctcctgctcatccctcatggagcccctgacggactcccgc acacacacacgcaaccagagcctggcccagagcctcctacagaatgcgcagagagagtcc tccaagcctgctgagaaggtgtcccagttagccttacccctcagcccgtggtccagtgag ttgctggtggccacccaggtcctacgccaggtgacaggggacccggtggcggctagcgag tggctcttggcggtgacctcggccctgcccctgagccagcgcgtcccgtctcccctcacc cttaccgtggctcacctggtggtcaccggtcagcaggacgtctgcagactggccctgaaa accgcagctgccatcgcccaggcagatcccgcacaggtcccatcccttcttcatgttctg ttgtttaagctggggaaggagtgtgacccagacttgtcccacgctgtgctgtactcgctg ccaaactttgggacccataagttgtgccttccccaggtgctccacactctccagatgctg ggcagcgcccccaagctgagggccgtggcactgcgcctcatgaccgctctgtgggagaaa caggaccgtgtgtaccctgacctccagaggctgatctcccagttcgagaagtctgtgctc ctggggaaggaggcccagtgggaacagattctagccagggctgcctgtgtccgagacatt tgcagagagaggccctaccagcacggaggggacatgctggctgccatcacacacactctg gcccagtgttccagaccagaccaggccgcccctgctgccttggcactgcaaggtctacac gagctctgccgcaccgaggtggtggatgtgggctccacatggacagccttgggccctaag ctgagctgtgactctagacctctggtggtcaaggccatagcagagctcctggctctgctg ccacagctcactgtcaagacagaggagtacgagaaactcaaagagcaggttgtcagcttt ctctggggctacgctctcaacaaggaacctgaggtggccagttgtggatacaaggctctg tcagagttctcagaggcagcgcacacgctccttcacctccccgagcaggtcaggccagtc gcaaaacttcctgaaagtgtggaggaggaacaggtaaaggagaaagatgaggaggaggag gaagatttgtccattccaggtccatcctatgtgaagctcctaggtctcacatccctctca gtcctgccagcatttgagctcttcctgacctcactggtgaggcaggagatgagccagatg ccccgtggggtgtaccactctgccctgaaaagggggagcctccggtcagaccaggggaaa acggtggcagggatcccaggcttcatgctgaaaacctatgagaagagcaaacagcctggt ctcaaacctggcctggcagctggcctccttctctcctttgacttgcccgtccagaccgac cgagatggacgaccaatcaaccgcttcctcctcagcagggggcggagctaccagcagatg ttagccactctcattcacgaggtgaacattcagccatcagagtggcatcgggccctcctc ctaccccaggcctggcgagggttcatgagccgagcgtaccatgccgtcctacagggccgt cgggcagagctggagatgcagcagaagcaaggcaaggagagtccagaggagctgcagtac aaacagcactgtgcctggctctgggtcagggaccagctgactgatgttgtcaaatctgca gcaaaggacagtccggtggtgcaggggaactccatcttggctctgagcggtctggcttcg gtgctggccaaatacgagagcaacatgcccgctgacacggagggaggacttggggtgggc cctgagatcctgtccacatccacctggctggccatggtcctggacactctcctcagcatc gtcagcagcagctacaagcccagaggacaagtcttcccctggttcctacaccggtcctac tcgggagagaacacggccagtgccatcgcccgctcctgtgccgccctggccctgtccctg gtggtgcccgtgctggttgcctggcacaaggacagcgtgccacaggtcctagccaccctg agggcggggcttcccggctcgcccactgcagacgactcccaggccgtccagttccactct ggcctggccctgggcatgctgctatcctgcctgcaccaggagaggctcagtgatgtgtca ggtcagaagatcacagagctgttgatgagttctctagacactctggaagcctgctgcttt gacagcaacctggagtacaatgcgggctgtgtgctgggactaggcctggtgctgggggcc cttagtggcagtggacagacagaacaccgggcccgtgtgggcctcaccctggacaagctg ctggaggccctacagggggacagcagcagtcagggtcgcatgctgcaggaggtgttggcc tactctgtagcaggtgtgggggtggcagccttcagtggaggggtagttgatgcccttaaa tcagaggagatcatgagcactctccgtagcatgacagaggagagccagcagactccaggt ttctcattggctcttggcctggttgttcatggtctgtcatcctgcggccacggcaaggca gaggacatccaaccccgccttctggatgcctggatcaagatcctactggctgagggctgt cccaccatgcagaggctggctgctgtcaacggcctggtggctctggtgggatcagagact ggcatccttcagctgaagaatgaatctgagcagtcctcccagcagcagagcagaatgaac gaggtcatacgggccatcacacagatcatcacattctcaggggccatcgggctgcagtct aacagtgcctgtctggtggggcacctccacctggcccacatgtccaccagccacagccgc acagcagtgccccaggacttcagttacctcccagagaagagtgtgatcaggtctgctgtg gacttcctcaccgaggcaggaaagaaaggtccagagtttgcccaccctagcctggtgaag acagccctggcctccctggccacagtgggagggagttaccagtacccccctgtcaactgg agcgccatcctgtcccctctcatgaggctcaactttggtgaggtggtccaacaccaatgt atagagctggcatccaaccaagcccagtcttcccagagtgcatctctcttcctgggggtg tggctgagccctcccctggtccacagtcttagtatgtggacgcgaggtcacctgtacgac aatctctctgtatggatgaagcacgtgtcggaggacaagcttcaggtttacgtggagacc ctgggtctgcagcagttccagcagcacgtccggccccagcgcctggccatctgtttatcc ctcctccggggcctggcacaggccatggccctccccaacccgcccaacaccgtctgggcc gtcctgtgtactactatagagaagatcttcaacgtactccccaaccacatacaggaccaa gaggtgcacctgtacgtgggagtctccaaatgtctgtccgagttggctgacacagagatc gaccgcatcgcccaagtcacagaggaacagatggagaagaccagcttcatcctggctcac ctcacctctcagggccgagtgccactcctgggcctcaacgatgtcattgcggccgtgctc cggggttggtccagccacaaggtgggctggctcctcctgcagactttctaccaatgccgt ctggccgccagccccaacacaggtgtgtccaaacgaatggagtggcttttggagctgatg ggactcataagaaatgttgcttacggagtgaccgctgtcaagtgtggagacaccaggcag gccactgacttcctgctccaggtattcgctgcggcggtgatctcctggggcgaccacacc atgcccctccttctgggcgttaggacccagtggtttccatggcagcaggggtcagagccg cccggtctacctcacgctctctacggtgacgccgtgctggccgagcagtcagtctcgcta tgcctgttgggattgccccacagcctgaggcagctattggctaaagagccctggagggaa cagtcacagaagttcatagattggcttttcagcatcactgaaggtccggaaactggtctg tcagagacttccatcaacactgccaaagctgccttgctggctctgaagtcctccacggat ttcaagaaaaaagcggtgtggacgcgagcgtacggttggtga

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