Oncorhynchus nerka (sockeye salmon): 115138131
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Entry
115138131 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115138131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115138131
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115138131
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115138131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
115138131
NCBI-ProteinID:
XP_029530495
LinkDB
All DBs
Position
LG12:11685983..11701931
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AA seq
779 aa
AA seq
DB search
MNNDFNDLLIRLNKDTKYCCTCTEYQHGRRRMLLASAVVVWEWLNEHGRWRPYSPAVSHH
IEAVIRNDPRGGSVVLGQVDSRLSPYIIDLHSMHQFRQDTVLWRDPRLSTVTPGTLRPVR
RSFYDPTSAPGKGWLWEWENDTGSWTAYDTEVGIAIQAARDRQQPWLDLAPLGFCYLIDF
QSMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKTHHAWGPSPAGLPGVGVSGVGMGNGNG
SAYPSGALPASAITSLGQPCACQQCMLVLSVKAGAMATAHTLGRRPPQNKPPSPKLGGGY
SAMGGSYSLTLPRPPSSMARSLSPHRTSAGGASGGVGVGGGFAHSLSLLGSATAALSLTS
TRPPPPPLPPLPPPPPPPPSSIASSVILPPSSSFSMASSGPPSMPAPAPLLISTATSSCT
PSPSARVLGPVSSAAAACAAPLPPRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNL
NGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTK
KQARKGKTPEEVVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGIQRAESVGRLAQ
CGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCK
TIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFSV
GTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgattttaatgatttattgattcgcttgaacaaagacacgaaatattgttgc
acctgtacagaatatcaacatggaaggcgtaggatgttactagcgtcggccgtggtggta
tgggaatggctgaacgagcacgggcgctggcggccttactcaccggccgtctctcaccac
atcgaggcagtcatccgcaacgacccacggggtggtagtgttgtcttaggccaggtggac
tctcgcctctcgccctacatcatcgacttgcattccatgcaccagttccgacaagataca
gttctgtggcgtgaccctcgtctctctaccgttaccccaggtaccctccgaccggtgcgt
cgcagcttctacgaccccacttcggcgccgggcaagggctggttgtgggagtgggagaac
gacacaggctcgtggacagcctacgacacagaggtgggcatcgccatccaggcagcacgc
gaccgtcagcagccctggctggacctggcgccactgggcttctgctacctcatcgacttt
cagagcatgacccagatcaatgggcagacgcagcgctgccgccgcatccaacgccgctcc
gacttggcctaccctctggtgtcggggccccttcccaagacacatcacgcctggggaccc
agccctgcaggactgccgggggtgggggtttccggagtgggcatggggaacgggaacggt
agcgcctacccaagcggcgccctgccggcctctgccatcacatcgctgggccagccctgc
gcctgtcagcaatgcatgctggtattgagcgtcaaggcaggcgccatggcgacggctcac
accctgggcaggaggccacctcagaacaagccgcccagccccaaactaggtggtggttac
tcggccatgggggggtcttactcgctgactctcccccgccccccctcctccatggccagg
tccttgtccccacacaggacgtccgcaggcggggctagcggtggtgtaggggtcggcggc
ggcttcgcccactcgctctccctcctgggttcggccaccgccgcactctccctcacctct
acccggccccctcccccgccgctacccccccttccgcctcctccaccgcctccaccctcc
tccatcgcgtccagtgtcattcttcctccctcctcttccttctccatggcgtcctccggc
cctccgtcaatgcccgcgccggctcctcttctcatctccacggcaacctcctcctgcacc
ccctcaccctccgcccgtgtcctggggcccgtgtcttcagcagcggcggcctgtgcagcc
cccctgccacctcgtgccagccttgccgggctcagccgacccgccctgcagcgcatcgcc
atggcccagtccagagccctcatcgcctccggtgtcccaacggttcctgtgaagaacctc
aatggatctagccctgtccaccctgcattggcaggtattacagggatcctgatgagcgcc
gcaggacttcctgtctgtctgacccgacctcccaagctggtgctccaccccccgcccgtt
agcaagagtgacataaagcccgtccccggcctcggccactgctgccgcaagaccaccaag
aagcaggctcgcaaaggcaagacccctgaggaagtagtgaagaggtaccttcagaaggtc
cgcaaccccccagaggaggactgcactatctgcatggaggccctggctgggccctcggga
tacaagggccccggagttgggggaatccagcgggcagagtcggttggtcgcctggctcag
tgtgggcaccagtaccacctgcagtgcttggtggccatgtacaacaacggcaacaaggac
ggcagcctacagtgccctacctgcaagaccatctacggcgtgaagacggggaaccagcca
cccggcaagatggagtaccacgtcatcccccactcgctgcccggccaccctgactgcaag
accatccgcatcatctacaacatcccccccggcatccaggggcctgagcacccgaacccg
ggcaagccattcaccgcccggggattcccccgacactgctacctccctgatagcgagaag
ggacgcaaggtactgaagctgctgctggtggcgtgggaccgccggctcatcttctcggtg
ggcacgtccagcaccacgggcgagtcggacacggtcatctggaacgaagtgcaccacaag
actgagtttggctccaacctaacaggccatggctaccccgacccaggccacctggacaac
gttctggaggagcttaaggcccaggggatcacagaggaggagtgcctacccagagactga
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