Oncorhynchus nerka (sockeye salmon): 115138182
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Entry
115138182 CDS
T07952
Name
(RefSeq) metastasis-associated protein MTA2-like isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115138182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115138182
03036 Chromosome and associated proteins [BR:
one03036
]
115138182
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115138182
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
115138182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
115138182
NCBI-ProteinID:
XP_029530597
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All DBs
Position
LG12:14185630..14217760
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AA seq
672 aa
AA seq
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MAANMYRVGDYVYFENSSSNPYLIRRIEELNKIMVNPMTANGNVEAKVVCLFRRRDISGN
LNTLADSNARDFEEESKQPTVSEQQKHQLKHRELFLSRQFESLPATHIRGKCNVTLLNET
DVLAGYLEKEECFFYSLVFDPVQKTLLADQGEIRVGSKYQAEIPDKLAEGETHTRIQEKL
ETKVWDPDNQLKDPQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHA
MDTLQKNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDF
LPWKSLASVVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIMAPGNKP
GMNGAAGFQKGLSCESCHTAQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGA
ARSVSESTPRGHMTRQEVQGLSPFTTSGGRAKLLAKNRQTFILQTTKLTRIARRVCTDIL
QPRRAARRPYASINANAVKAECMIRLPKATKAPIKNRSIPRPPLATIVKELAIQAPLKLK
APRGAPTPINRNQANQPRGGSGLLGKRPFDSSSQAAGLPFPTNGRPFTSGMRTTSQSVIK
RQKVNQGDAPNPVVFVATKDTRALRKHLTQSEMRRAARKPHLPVRVKLPLGPRTLVLPTL
PSSTSEPIVLED
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatgtaccgagtgggagattatgtgtactttgagaattcctccagcaac
ccctacctaatccgcagaatagaagagctcaacaagatcatggttaatccaatgacggcc
aatgggaacgtggaagccaaggtggtgtgtctgttccggaggcgggacatctcgggcaac
ctcaacactctggccgacagcaacgcgagagactttgaggaggagtccaagcagcccact
gtgtctgaacagcagaaacaccagctgaagcaccgagagcttttcctctctcggcagttt
gagtctctacctgcaactcacatacgagggaaatgtaacgtcaccctcctcaacgaaact
gacgtcctcgccgggtacctggagaaagaggagtgtttcttttactcgctagtgtttgac
ccggttcagaagaccctcctggcggaccagggagagatccgcgtaggctccaagtaccag
gccgagatccctgacaagctcgccgaaggtgaaacacacacccgtatccaggaaaagctg
gagaccaaggtctgggaccctgacaaccagctcaaagacccccagattgaccagttcctg
gtggtggctcgtgctgtggggacgtttgccagagccctggactgcagtagctccatccgt
caacccagcctgcatatgagtgctgcagcagcctccagagacatcacactgttccatgcc
atggacaccctgcagaagaacggttacgacctagccaaggccatgtccacgctggtcccg
cagggcgggccggtcctctgccgtgacgagatggaggagtggagtgcctcggaggccatg
ctgtttgaggaggccctggagaagtacggcaaggactttaacgacatccgccaggacttt
ttaccatggaagtcactagccagtgtggtccagttctactacatgtggaagactactgac
cgctacatccaacagaaacgactaaaggcagcagaagcagacagcaagctgaagcaggtg
tacatccccacctacaccaaacccaaccccaaccagatcatggctcctggtaacaagcct
ggcatgaacggggccgctggcttccagaaaggactgagctgcgagagctgccatactgcc
cagtcagcacagtggtacgcatggggtcctcccaacatgcagtgcagactgtgtgcctcc
tgctggatctactggaagaagtatggaggcctgaagacccccacacagttagagggcgcc
gcaagatctgtctcggagtccactccgcgcggtcacatgacccgccaggaggtgcaaggc
ctgtccccgttcacgacgagcggggggcgcgccaagctgctggccaagaaccggcagaca
ttcatcctgcagaccaccaagctgactcgtattgcccgccgcgtctgcactgacatcctg
cagccccgccgcgcggcacgccgcccctacgcctccatcaatgcaaacgccgtcaaggcc
gagtgtatgataaggttgcctaaagcaaccaaggcccctataaagaaccgctctatccct
cgaccaccgctggccactatagtgaaggaactggccatccaggctccactcaagctgaag
gcccccagaggcgctcccacacccatcaaccgcaaccaggccaaccagccccgcggggga
tcaggcctgctcgggaagaggccctttgacagtagctcacaggcggcagggctgccgttc
cccaccaatgggaggccgttcacatcgggcatgaggaccacctcacagtcggtgatcaag
cgtcagaaagtgaaccagggagacgcacccaaccccgtggtgtttgtggccacgaaagac
accagggctctgagaaaacacctgactcagtctgagatgcggcgtgcagccagaaaacct
cacctcccggtcagggtcaagctgcccctaggtccccggaccctggttctgcccaccctg
ccatccagcaccagcgagcccatcgtcctggaggactaa
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