Oncorhynchus nerka (sockeye salmon): 115138184
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Entry
115138184 CDS
T07952
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115138184 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115138184 (taf6l)
03036 Chromosome and associated proteins [BR:
one03036
]
115138184 (taf6l)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115138184 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
115138184 (taf6l)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115138184 (taf6l)
STAGA complex
115138184 (taf6l)
TFTC complex
115138184 (taf6l)
SAGA complex
115138184 (taf6l)
SLIK complex
115138184 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
115138184
NCBI-ProteinID:
XP_029530599
LinkDB
All DBs
Position
LG12:14224841..14232001
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AA seq
637 aa
AA seq
DB search
MEERRFAEVPRESVKLMAESAGVELSDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKL
TVEDFNRALRWSNVEAIAGYGAQDALPFRPIKEGELFFVDDRDVNLVELALATNIPKGCA
ETMVRVNVSYLDGKGNLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVALLDL
QSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVM
YCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRP
LCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAIL
VAVERLLKMKALSLSQPAEGISSAQPGSGGVMGFRVSSPGLSPPPEPLSEAALGIASHLQ
GPGGAGTPWDDWTPVPLPAMYCELYSFFGDSLAVRFSTGPSLGGCPPSAPSQPPDTRKEP
PGPAANPDTTRKMPQLTANLNISPRQDGSPRTEPAPPSLAATAPGRSLARSSSSSSIQRR
NSSSRPGQRSAGPSRDVFTKARFPPPQTGPPTFSFLIGGRQMGRRCQGRRFQTSFSSPPP
LSTVPPRAYAHKLPVIGRVGKPVRRWTCSHYSLHLPL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcgcttcgctgaagtccccagagagtctgtcaaactcatggctgagagt
gcgggagtggaactcagcgacgatgtggctgcattgttggctgaagatgtctgctaccgg
cttagggaagccacacagagcagctctcagttcatgagacatgccaagaggaggaagctg
acagtagaggacttcaacagagcactgcgctggagcaatgtggaggccatagctggctac
ggtgcgcaagatgccctacctttccgaccgatcaaggagggcgagctattctttgtggat
gaccgtgatgtcaacctggttgaacttgccctggccaccaacatacccaagggctgtgca
gagaccatggtgcgagtgaacgtgtcttatctggatgggaaaggcaacctggagcctcaa
ggtacagttcccagtgctgtacaaactctctcggaggatctgctcaagtactaccagcag
atcacccgggccatactaggagaggacccacaccttatgaaggtggctttgctggatctc
cagtccaactccaagattgctgccctcctgccatattttgtatatgtcatcagtggggtg
aagtctgtgagccacgacctggagcagctgaaccgtctgctgcacatggtgaagagtctg
gtgcagaatccctacctgtaccttggctcctacgtgcgtagcctggtgtccagcgtcatg
tactgcatcctggagccgctggccgcctccatcaaccccctcaacgaccactggacttta
agggactacgcagcacttctgctcagccacatcttctggacccatggagacctggtcagt
ggtctgtaccatcagattctgctgtctctgcagaaggttctgtcagacccggtccgcccg
ctgtgttctcactatggagctgtcgtggggctacacgcactcgggtggaaggctgttgag
cgggtgttatatccgcacctgccagcctactgggctaacctgcaagctgtcctggatgat
tactccgtctccaacgcccaggtgaaagcagacggacacaaggtctacggagccatcctg
gtggcggtggagcgcctgctgaagatgaaagccctgtctctgtcccagccagcggagggg
atcagcagcgcccagccgggctctgggggcgtgatgggtttcagggtgagttcccccggg
ctcagcccccctccagagcccctctccgaggccgccctgggcatcgccagccatctgcag
ggacctgggggggctggcaccccctgggatgactggacccccgtccccctgcccgccatg
tactgtgagctctactccttcttcggcgacagcctggcggtacgcttcagcacgggcccc
agcttgggaggttgccccccgtcagccccctcccagccccctgatacgaggaaggagccc
cctggtcccgctgctaacccagacaccacgcgcaagatgcctcagctcactgctaacctc
aacatcagcccccggcaagacgggagccctcgcactgagcccgccccacctagtctagct
gccactgctccaggaaggtccctggctcgctcttcctcctcatcctccatccagcgcaga
aactcctcctcccggccgggacagcgctcagcgggtccatcccgcgacgtgttcaccaag
gcccgtttcccccctcctcagaccggaccccccacattctccttcctcatcgggggacgt
cagatgggccggcgctgccagggtcgccgcttccagaccagcttcagctctcccccaccc
ctgtccaccgtaccgccccgtgcctacgcccacaagctgcccgtcatcgggagggttggc
aaaccggtgcgccgctggacctgctcccactactccctgcacctgcccctctga
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