Oncorhynchus nerka (sockeye salmon): 115138206
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Entry
115138206 CDS
T07952
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115138206
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GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
115138206
NCBI-ProteinID:
XP_029530673
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All DBs
Position
LG2:32183577..32378631
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AA seq
1618 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQVNDGIVVYKNGKLT
EGALILEVENLSISGLPLYDVQTVIKNCSGPIRLRTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRHGEVPGVDYNFLPVEDFLALEQRGTLLEIGTYEGN
YYGTPKPPSQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPSVRPYALRENAPSYGVINALSSTTDGSQQTHTHLSRPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGLYYVDHINRKTQYENPIQEAKRRKQLEQQQPPEGERYIREWIED
ATMAGAPLASYTANHQETYRDTQARPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKS
HRGFGFTVVGGDEPDEFLQIKSLVLDGPAAIDGKMETGDVIVSVNDTCVLGYTHAQVVKV
FQSIQIGSIVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQESYDSPSSHGSQ
TGGPVNGMRESGPHSPSSAEVASNGSHSYPSDSVTLASSIATQPELITVHMEKGDKGFGF
TIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEV
TMLVQRGGGVAPAKKSPKLQLARKDSQNSSVHSVSSHRSTHTDSPVHPSLATPFSESAAP
PPPSQPLPGLPPQDPQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYG
FRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAA
KQGHVNLTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSS
GSGSTSGIGSGGGGGGSGSTVVNTALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAG
NACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTL
RIIPGDESSNASLLTNAEKIATITTTHTAQQQATPEPRNNTKPKQESSFEFKSPQAPPPP
APTTQPPAQDAGFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGKMKVGD
EILEINGESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYDPSIDGAGTAAGVQNAS
EVNTLPYNNAPSDTNAPVPHKPSRSKNKKGHHHSKHRSPEKKSQGGASGETRASKQSKKK
VDKSQRSGGDIHGTHHRGHHSPNKGRSRARSAENTLDSRHSQGHHNTHRSPYRSTHRNRS
PYGHRSPYRSPHRSHHHSPTRYRRTQSSDPSRQPSLDRQRNREPARPNGEKAPVLRKPPG
PVPSHFLDESLLQEPPALDRLNREVTRLRESREEHLFGEDSLLLKASNLERDYREDSLLS
AAARGQRGEILPRVHTPESDSAYKRYSSLLRGRSPERVEREPRYAPRHESPDPHHRARSL
GRDISPVRSFREPEEEEAAAPRLKEYYSTLKSNANRASKALPEPKRKAHKDGTKDLSI
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgcggtc
ctcaaagacgctcgcggtgacttaaatgtgcaattgctcggtggtgcggagaacggagag
ttcgcctacatcggacaagttaacgatggtatcgtggtttacaaaaatggaaaattaaca
gagggggcgttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaagaattgcagtggtcccatcagattgagaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgattccagaagtcctctccg
gaccacgagctgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtcccccgcgtcacggagaggtccctggggtcgattacaacttcctgccggtggag
gacttcctggcgctggagcagaggggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccaccgagccagccccctagtgggaaagtgattactagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcaagtgaacccgacgaacacccctccgtgcgc
ccctacgccctacgtgagaacgccccgtcctacggtgtgatcaacgcgttgtcatccacc
acggacggctctcagcagacacacacacacctcagccgtcctcccacagaggaggacccc
ctgggacctctagctgataactgggagatggcatacacagagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggatcgacccccggtgcctcaacaaacctcct
aaacccctggaagaatgtgaagacgacgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggctgggagaaaatagaggacccagtctacgggctttactatgtg
gatcacatcaacaggaagacccagtatgagaaccctatacaggaagctaagcgacggaag
cagctcgagcaacagcagccaccagaaggtgagcgctacatccgagaatggatagaggat
gctaccatggctggtgcccccctggccagctataccgccaaccaccaggagacctacagg
gacacccaagccagacccccactgccgcccctcatcgggccaaaacgagggaagcccttc
ttcacgcggaacccggcggagctgaagggaacctttatcaacaccaaactaaggaagagc
caccgagggttcggcttcaccgtcgtcgggggtgacgagcctgatgagttcctacagatc
aagagtctggttctggatggacctgctgccatcgacggcaagatggagacaggtgacgtg
atcgtgagtgtcaatgacacgtgcgtgctgggctacacccacgctcaggtggtgaaggtc
ttccaatcaatccagatcggctccatcgtcaacctggagctgtgccgcggctaccccctg
ccctttgacccagacgaccccaacactagcttggtgacctccgtggccatcgtggacaag
gagcctatcatcatcaacggccaggagagctacgactctccgtccagccacggcagccag
accggaggccccgttaatgggatgagagagtcaggaccccacagtccctcctctgccgag
gtggcgtccaacggctcgcacagttaccccagcgactctgtgacgctggcgtcgtccata
gcgacgcagccggagctgatcacagtgcacatggagaagggagacaaaggctttgggttc
accatcgcagacagccctgcagggggaggacagagggtcaaacagatcgtagactacccc
cgctgcaggggcctgaaggagggggacattattgtggaggtgaacaagaggaacgtccag
agcatgagccacaaccaggtggtggacctgctcagcaagtgccccaaaggaagtgaggtc
accatgctggtgcagagaggtggaggggtggctcctgcaaagaagagcccaaagctgcag
ttagcgaggaaggacagtcagaacagttctgtgcacagtgtgtccagccaccggagtacc
cacactgactcccctgtgcacccatccctggccaccccattcagcgagagcgccgccccc
ccacccccctcccagcccctgcccggcctgcctccccaggaccctcaggcagacggaacc
atccagaggaaaccggaccccttcaagatctgggcccagtccaggagcatgtatgaaagt
aggctgcctgacttccaggagcaggacatcttcctgtggagaaaagacacgggctacggg
ttccggatcctgggagggaacgagccaggagagccgatctacatagggcacatagtgaag
tacggggcagcggatgaggacgggcgcctgcgttcgggggatgagctcatctgtgtggac
ggcacggcggtggtggggaagtctcaccagctggtggtacagctgatgcagcaggccgcc
aagcagggccacgtcaacctcaccgtgcgacggaagaccggctacggcgggtctaaaggg
gagggcgaggtgcccccgtccccagcctcgtctcaccacagcagcacacaggccccctcc
ctgacagaggagaagcggaccccccagggcagccagaactccctcaacacggtcagctcc
ggcagtggctccaccagtggcatcggcagcggggggggcggtgggggctcgggtagcacc
gtggtcaacactgccctgcagccctacgatgtggagatccgtcgcggggagaacgagggc
ttcggatttgtgattgtctcttctgtgtcccgacccgagtctggcaccaccttcgctgga
aatgcatgtgtggccatgccccacaaaataggtcgtattattgaggggagccctgcggac
cgctgtgggaagctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcacc
aacaagtcccactcggacatcgtcaacctgatcaaggaggccgggaacacggtcacgcta
aggatcattcccggagacgagtcctctaatgcatcactgctgaccaacgctgagaagatc
gccactataacaactactcacacagcccaacaacaggctacacctgagcccagaaacaac
accaaaccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccct
gccccaacaacacaacctccagcccaggatgctggcttctactcggtggacctggagaga
gagaacaaaggttttgggttcagcctgagaggaggtcatgagtacaacatggacctgtat
gtgctgagattagccgaggatggagcagctgtacgcaatggcaagatgaaggtgggagat
gagatcttggagataaacggtgagagcaccaagggcatgaagcacgcccgcgccatcgaa
ctgattaaaaacggcggtcgccgcgcccgcctagtcctcaaacggggcgacggctcggtg
cctgaatatgaccccagcatcgacggtgccggcacagccgcaggggtacaaaacgcttcg
gaagtgaacaccctgccctacaacaatgcaccatcggacacgaacgcaccagtccctcac
aaaccatcacggagcaagaacaagaagggccaccaccattccaaacaccgatccccggaa
aagaagagccagggaggggcgtctggggagacgagggcctccaagcagtccaagaaaaaa
gttgacaagagccagaggtctggcggggatatccacggcactcaccaccgaggacaccac
tccccgaataagggccgtagccgggcccgcagcgcagagaacaccctagacagtagacac
agccaagggcaccacaacacccaccgctctccctacaggtccactcaccgcaatcggtcc
ccctatggccaccggtccccctaccgctcccctcaccgctcacaccaccactcccccacc
cgctaccgccgtacccaatcctcagacccctcccggcagccctccctagacagacagcga
aacagagagccagcaaggcccaacggggagaaggcaccagtgctgaggaagcctcctggc
cctgtgcccagccacttcctggatgagagcctcctacaggagcccccagccctggaccgg
ctcaacagggaggtcacgcgactgagggagtccagagaggagcacctgtttggggaggac
agccttctgctgaaggcctccaacctggagcgtgactacagagaagacagcctgttatct
gctgctgcccgtggccagagaggggagatccttcccagggtccacacccctgagtcagac
agcgcctacaagagatacagctcactgctgaggggccgctcgcctgagagggtggagaga
gagccgcgctacgcccccaggcatgagtccccagacccccaccatagagcccgtagcctg
ggccgagacatttcacctgtcagaagcttcagagaaccggaggaggaggaagcggcagca
cccagactgaaggagtattacagcacacttaagtctaatgccaaccgtgcttccaaagct
ctcccggagcccaagcggaaggcccataaagatggcaccaaagacctgagcatctga
DBGET
integrated database retrieval system
