Oncorhynchus nerka (sockeye salmon): 115138211 Help Entry 115138211         CDS       T07952                                  Name (RefSeq) protocadherin-7-like isoform X1   KO K16498   protocadherin delta 1 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     115138211  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:one01009]     115138211   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:one04515]     115138211 Protein phosphatases and associated proteins [BR:one01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      115138211 Cell adhesion molecules [BR:one04515]  Cadherins   Protocadherins    115138211 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Mid2 TMEM154 KIAA1549 Adeno_E3_CR2 Motif Other DBs NCBI-GeneID:  115138211 NCBI-ProteinID:  XP_029530677 LinkDB All DBs Position LG12:17181901..17401078 Genome browser AA seq 1258 aa AA seqDB search MRTTGAVDYICYSILILQLLNQPDAKQVLRYRLAEEGPADVRVGNVAKDLGIVAGSGEVT FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD SGESSRRLGSNSGGRGVDSRRFDEGAARSSVFELQVADTTDGEKQPQLIIKGALDREQRD SYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKAVYEADLPENSSPGAPILQLKA ADADVGVNGQIEYVFGAATESVRRLLRLDEGSGWLSVLHRIDREEVSQLRFTVMARDRGQ PPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQ GENGIVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGS PSLASNNSLIVKVGDFNDNPPIFSQNVVEVSFLENNAPGERVTTVQAIDADSGKNAEIAY SLVSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGMPILQGSATVVVLVADK NDNEPKFMQDVFTFYVKENLTPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTG TIFSTMSFDREQKTSYTFRVKAVDGGDPPRSATATVSLFVMDENDNPPTVTFPINSTYTL LPPSSNVRTVVRTVIATDPDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHY GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLGTPLNTNIAGDPNYD LGKQRLSIVIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKGK KPKKDKKNKKSKQPLYSSIVTIEASKPNCQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDL ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTI NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLEESETPSSKGSSGGPRLGALPLPE DSYERTTPDGSVGEAEHMENDTRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPK TTTNQQPKLSTFMTGGGSGSSPPEQQQQHPGSQEALAAMSNGDPSSHVMLGNDRNRNLLN KKTASSSSSYEGFGSPSFSPPGVEERVVGNPIEEIPLAPTGEYKPSPCGTLTRREVYL NT seq 3777 nt NT seq  +upstreamnt  +downstreamnt atgaggactactggcgcagtggactatatatgctacagtatactcatcctgcagctgctg aatcagcccgatgccaagcaagtgttgcgatatcgcttggctgaggagggacccgccgat gtcagggtagggaacgtagccaaagacctcggaatcgtcgccgggtctggtgaggttacg tttaccctcgagtccggctctgattttttcaaaatagataatataacaggcgagctgacc actaatgaacggcggatagaccgtgaaaaattacagcaatgccaaatgatatttgatgaa aacgaatgtttcatagattttgaagtgtcagtaattggaccggctcagagctgggttgac ctgttcgaggggaaagtcattattttagacataaatgacaacaccccgtctttcccctct cctgttctgacactgtcagtggaagagaacagaccgattggcactctctatctcctgccc actgccaccgacagagattttggcaggaacggaattgagagatatgagcttattcaggac agcggggagagctccaggcgcctgggttcgaactcagggggacgcggagtggacagcagg agatttgatgagggggcagccaggagcagcgtctttgaactgcaagttgctgacacaact gatggggaaaaacagccgcagctcatcattaaaggagcgctggacagggagcagagggac tcttatgagctcaccctgcgtgttagggatgggggcgaccccccacgctcctcccaggcc atcctgagggtgatgatcactgatgtgaatgacaacagcccccgctttgagaaggctgtg tatgaggctgacctgccagagaacagctcccctggtgcccccatcctgcagctgaaagca gctgacgcagacgttggtgtgaacggtcagattgagtacgtatttggtgcggccacagag tcagtgcgtaggctgctgaggctggacgagggctcggggtggcttagcgtgctccatcgt attgaccgtgaggaggtgagccagctgcgcttcacggtaatggcaagggatcgaggtcag ccacccaaaatggacaaggcaaccgtggtcctcaacatcaaagatgagaacgacaacgtg cctgctatcgagatacgtaagatcggacgcattttcttgaaagatggtgtggccaatgtg gcagaggatgtagttgtggacacgcctatagctttagtccaggtgtcagaccgcgaccag ggcgagaatggcatcgtgacctgcactgtggtgggtgacgtacccttccagctcaaaccg gccagtgagattgagggtgagatgaataagaagaaatactttctccatacatcagccccg ctggactatgaggccacacaggagtacaatgtggtcatcgtggctgtggactcaggaagc cctagcctggccagtaataactcgcttatcgtgaaggtgggagacttcaacgacaaccca cccatctttagccagaacgtggtggaggtgtcctttctggaaaacaatgccccaggcgag agggtgaccacagtgcaggcaatcgatgctgacagtggcaagaatgcagaaatcgcctat tccctcgtctcctctgtaaatgggatattctccattgatgcagacagtggtgacatcaga gtaaacaccattctggacagggagcaaacagagaggtatgagttcaaagtgatagctaaa gataagggcatgcccatacttcaggggtcagccactgtggtggtcctggtggcagataag aacgacaatgagccaaagttcatgcaggacgtgttcaccttctacgtcaaagagaaccta acacccaacagccctgttggcatggtgaccgtcattgacgctgacaagggccagaacgct gaaatgagcctcttcatcgaggaagaggaggatatcttctccattgagaatgacacagga accattttctccaccatgtcatttgaccgcgaacagaagacttcatacacgtttagggtc aaggctgtggacggtggagacccacccagatccgccacagccaccgtgtcacttttcgtg atggacgagaacgacaacccgccaaccgtcaccttccccatcaacagcacttacaccctc ctgcccccctccagcaacgtcaggactgtagtacgaactgtcatagccactgatccggac acagggatcaacgctgacctgaactacagcatcatcggtggaaaccccttcaaactgttt gagattgacggaggcagcggggtcatctcactggtggggaagctggagcagaaacactat ggcctccatcgactcgtggttcaggtgaacgacagcgggcagccctcccagagcaccact acccttgtgcatgtctatgtcaatgagaccctctccaactccaccatcgtagaggcccag gtggccaagagcctgggtacgccgctcaataccaacatcgctggtgaccccaactacgac ctgggtaagcagcggctgagcatcgtcatcggggtggtctcgggcatcatgacggtcatt ctcatcatcctcatcgtcgtcatggcccgttattgccgccccaagaacaagaatggctat gaggcaggcaagaaggaccacgaggacttcttcacccctcagcagcatgacaagggcaaa aagcctaagaaggacaagaagaataagaagtctaaacagccactgtacagcagcatcgtc accattgaggcctccaagcccaactgccagcgctacgatggtgtcaacgagaagctgtcg gacagccctgggatgggccggtaccggtctgttaacggagggcccgggagcccggatctg gcccggcactacaagtccagctcgccactgcccacagtccagctccacccccagtcaccc acggccgggaaaaagcatcaggctgttcaggacctgccccctgccaacaccttcgttggc accggagataacatttcccttggatctgaccactgctctgagtatagcagtcaaaccatc aacaagtacaacaaacagccgttccgccgagtgaccttctcggtggtgagccagccccaa gacccccaccagcagggatcgctgcagagctgctacgacagcgggctggaggagtcggag acgcccagcagcaagggctcttcggggggcccaaggctgggtgcgctgcccctgcccgag gacagctacgagaggaccacgccggatggcagtgtcggtgaggcagagcatatggaaaat gacacccggcccttgcccgacgtagccatgacaggcaagtgcacccgggaatgcgatgaa tacggccactctgactcctgctggatgcctgtgcgcacgtcgcctgagcgccggcccaag acaaccacaaaccaacaaccaaagctttccaccttcatgactggcggtggcagcggcagc agccctcccgagcagcagcagcagcatcctggcagccaggaagccctggccgccatgtcc aatggagacccctcctcccacgtgatgctgggcaatgaccgcaaccgcaacctgctcaac aagaagacagcctcctcctcctcctcctacgagggctttggctcgcccagttttagccca ccgggggttgaagagagggtggtgggtaaccccattgaggagatccctctggcccccacc ggggagtacaagccctcaccctgcggcacgctcactcgccgggaggtctacctgtga

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