Oncorhynchus nerka (sockeye salmon): 115138236
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Entry
115138236 CDS
T07952
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115138236
03083 Polycomb repressive complex
115138236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115138236
03036 Chromosome and associated proteins [BR:
one03036
]
115138236
03029 Mitochondrial biogenesis [BR:
one03029
]
115138236
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115138236
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115138236
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
115138236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
DUF4114
Raffinose_syn
IBR
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
115138236
NCBI-ProteinID:
XP_029530750
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Position
LG12:complement(20229623..20235761)
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AA seq
355 aa
AA seq
DB search
MASCDTLYIETDGSEMPAEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMH
HHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPVPVPAAEEEYIEQTLVTVAGKSSG
RMKKGGSVRRNKKSYLGAPEASGRKWEQKQVQIKTLEGEFSVTMWASDDKKEIDHDTMVE
EHVIGESSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDSPRTIACP
HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG
CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatgcgataccctgtacatcgaaacggacggctcagagatgccagctgagata
gtggaactccatgaaatcgaagtggagaccatagagacaacagttgttggagaggacgac
gatgaacagcccatgatcgctttacagccccttgactccgatgatccacactcaatgcat
caccatcatcaggaggtaatattggtgcaaacacgagaagaggtggttggtgaagatgat
tcggacatgcacggagacgatgattacgaggaccaaattcttatacctgtcccagtccct
gccgccgaagaggaatatatcgaacaaactctagtgactgtcgccgggaagagttcgggg
cgaatgaagaaggggggaagcgtgaggagaaataaaaagagttacttgggtgcaccggag
gccagtggtagaaaatgggaacagaaacaagtacagataaagactttggaaggagagttt
tcggtgaccatgtgggcatcggatgacaagaaggaaattgaccatgacactatggtggag
gagcatgtcatcggggagagttcccctcccgattactccgagtacatgacagggaagaag
ctcccgcctggaggcatcccagggattgacctgtcagaccccaaacagctggcagagttc
gccaggatgaagccacggaaaataaaggaggacgactctcccaggacgatagcctgcccc
cacaaagggtgcactaaaatgttcagggataactcggcgatgaggaagcatttgcacacc
cacggaccgcgtgttcatgtctgcgccgaatgtggaaaggcctttgttgaaagctctaaa
ctgaagaggcatcaacttgttcataccggagagaagcctttccagtgcacgtttgagggc
tgcggtaagcggttctctttggactttaacttacgcacgcacgtgcggattcacactgga
gaccgaccctacgtctgtccgttcgacggctgcaacaagaagtttgcccaatctaccaac
ctcaagtctcacatcctcacacatgctaaagctaaaaacaatcagtga
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