Oncorhynchus nerka (sockeye salmon): 115138265
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Entry
115138265 CDS
T07952
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00860
Porphyrin metabolism
one00970
Aminoacyl-tRNA biosynthesis
one01100
Metabolic pathways
one01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
115138265
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115138265
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115138265
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115138265
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
115138265
6.1.1.17 glutamate---tRNA ligase
115138265
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class I (A)
115138265
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115138265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
GST_C_2
GST_C_3
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
115138265
NCBI-ProteinID:
XP_029530802
LinkDB
All DBs
Position
LG12:24215359..24307430
Genome browser
AA seq
1653 aa
AA seq
DB search
MALNLTINSSNPPLGALLTAEHVKGSVNVSVEEGKDNKLCVSQSVQFSDLNSITRYLARL
APSLGLYGSNMLEQTEVDHWLEFSAQRVCGQSGLAAALGELDKALELRTFLVGHSLTLAD
ICVWAALKGSSEWQSMQTQAGAFSHVARWFAFLGSQVPFTAVGHKYTNSKAPSRNSNSEK
EKQQDVGKFVELPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDD
TNPEKEKEDFEKVILEDVAMLQIKPDQFTYTSDHFPRIQGMAEQLLREGKAYIDDTPPEQ
MKAEREQRTESSHRSNSVEQNLKMWEEMKAGTEYGQTCCMRAKIDMASNNGCMRDPTFYR
CKNAPHPRTGTTYRVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQFYWVIEALRLRKP
YIWEYARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQ
GGSRSVVNMEWDKIWAFNKKVVDPVAPRYTALSGSYSVPVVIPEAPEEMKMAVKHPKNIE
VGMKAVWYGPRVLVEGADAETFTEGETVTFINWGNIIITKIHKDPRGKVTSLEGKLNLEN
KDFKKTTKITWLAETPHAPLLPTVCVNYQHLITKPVMGKEDDFKEYINKQSKLEEKMLGD
PCLKDLKKGDIIQLQRRGFYICDQPYEPISPYSCKESPCVLLYIPDGHTKEMPTAGSKSK
SQAATTPASTAKCKTAPVSAPAPPTASDASTVFSCIVAQGEKVRDLKTTKAPKEEVDKAV
KELLSLKAQFKHLTGQDYKPGMGLPASSAPQKAASPSSDSASCPFSCVTQQGELVRKLKS
EKAPKDQVDAAVKQLLAFKAEFKQITGQEYNPGMIPPDAAPAKNAPTASSSSPSGLYESV
TKQGDTVRKLKSEKAPKDQVDAALKELLALKAEYKQVTGHDYKPGAALAPAHAPVQSNPA
PTATSGSGIYERVTQQGDLVRKLKTEKAPKDQLDTAVKQLLSLKAEYKQATGQDYKPGVA
PAVSPAPVQASPAPQDQSGSSPQALFTQVVQKGELVRKLKSEKAPKDQVDCAVKQLLALK
TQYKALTGEDYKPVAATGASSREDKNRKDRENKSEKQAGGGGGGKKQPRGEKGKEASLGG
TGGGGDSGPKKQTRLGLEAKKEENLADWYSQVITKAEMIEYYDVSGCYVLRPWSYSIWES
IKEFFDREIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVAWVTRSGNTELAEPIAVR
PTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATK
EEAAEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQGA
TSHHLGQNFSRMFNIEFEDPRKPGEKQLAYQNSWGITTRTIGVLTMVHGDNMGLVLPPRV
ACLQVIIIPCGITASLPEAEKESLLAQCSKYLARLQRGETRVKADLRDNYSPGWKFNHWE
LKGVPIRLEVGPKDLKQGQCVAVRRDTGEKIILPEADTEKRLIQLLEDIQTNLFKRASDD
LNKHMVVADSMERFQKDLDQGRIVQIPFCGGIECEDWIKKTTAKDQDLEPGAPSMGAKSL
CIPFKPLKPLQPGQMCVSGKEAAQYYTLFGRSY
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaccttaccatcaacagcagcaaccctcctttaggggcgctgttgacagca
gagcatgtgaagggcagcgtgaacgtgtctgtggaggagggcaaagacaacaagctctgc
gtctcacagtcagtgcagttcagcgatttgaactccatcacgcgctaccttgcccgcctg
gctcccagtctgggcctgtacggctccaacatgctggaacaaactgaggtggaccactgg
ctggagttcagtgcacaacgtgtgtgtggccagtctggcctggctgcagccctgggggaa
ctggacaaggctctggagctgcgcacttttctcgtgggccacagcttgaccctggccgac
atctgtgtgtgggccgcgctcaaaggtagtagcgagtggcagtcgatgcagacacaagct
ggggccttctcccatgtggctcgctggtttgccttcctgggctcccaggtgcccttcact
gccgtgggccacaagtacaccaacagcaaggccccctcacgcaattccaattctgagaag
gagaagcagcaggacgtggggaagtttgtggagctgccaggagccgagatgggcaaggtg
gtggtccgcttcccccctgaggccagcgggtacttgcacattggccatgccaaggctgcc
ctgctcaaccagcactatcaggtgaccttcaagggcaagctcatcatgcgctttgacgac
accaaccctgagaaggaaaaagaggactttgagaaggtgatcctggaggacgtggccatg
ctgcagatcaagccagaccagttcacctacaccagcgaccactttccccgcatccagggc
atggcggagcagctgctgagggagggcaaggcctacatcgatgacacacccccagagcag
atgaaggcagagagggagcagcgcaccgagtcaagccaccgcagcaactcggtggagcag
aacctaaagatgtgggaggagatgaaggcaggcacggagtacggccagacctgctgtatg
cgggccaagattgacatggcctccaacaacggctgcatgcgcgaccccaccttctaccgc
tgcaagaatgccccccacccccgaactggcaccacctacagggtgtaccccacgtacgac
ttcgcctgcccaatcgtggacagcgtagagggtgtgacccacgcgctccgcaccacggag
taccacgaccgcgacgaccagttctactgggtgatcgaggcactgcgcctgcgcaagccc
tacatctgggagtatgcccggctcaacctcaacaacacggtgctctccaaacgcaagctc
acatggtttgtcgaccagggttacgtcgatggctgggatgacccccgcttcccgactgtc
agaggtgtcctgcgcagaggaatgaccgtcgagggcctcaagcagttcattgctgcccag
ggtggatccaggtctgtggtcaacatggaatgggacaagatctgggcctttaacaagaag
gttgtcgacccagtggcgcccagatacacagccctgtcaggatcctactccgtccctgtt
gtcatccccgaagcaccagaggagatgaagatggccgtcaaacaccccaagaacatagag
gtgggtatgaaggctgtgtggtacggacccagggtgctggtggagggggcggacgcagaa
accttcaccgagggagagacggtcaccttcatcaactggggcaacatcattatcaccaag
atccacaaagatcccagaggtaaggtcacctccctggagggcaagctgaacctggaaaac
aaggacttcaagaagaccaccaagatcacatggctggccgagaccccccacgcccccctg
ctgcccacagtctgtgtcaactaccagcacctcatcaccaagcccgtcatgggcaaggag
gacgacttcaaggaatacatcaacaaacagagcaagctggaggagaagatgctgggagac
ccatgtctgaaggacctgaagaagggtgacatcatccagctgcaaaggcggggcttctac
atctgtgaccagccctacgagccaatcagtccctatagctgtaaggagagtccttgtgtg
ctgctgtacatccccgacggccacaccaaggagatgcccaccgctggctccaagagcaag
agccaggccgccaccacacccgcctccacagccaagtgcaaaaccgccccggtctctgcc
ccagccccccctaccgctagcgacgccagcaccgttttctcctgcattgtggctcaaggc
gagaaggtgcgcgatttgaaaaccaccaaggcccctaaggaggaggtggacaaagcggtg
aaggagctgctctcactcaaggcccagttcaagcatctgactggccaggactacaaacca
ggcatgggcctgcctgctagctccgcccctcagaaggcagcatccccttcttctgactcc
gcctcctgccccttttcttgcgtcacccagcagggggagttagtgaggaagcttaaatcc
gagaaggctcccaaggaccaggttgatgctgcagtcaaacagctgctggctttcaaagct
gagttcaaacagatcacaggacaagagtacaatccagggatgatccctcctgatgctgcc
ccagccaagaatgcccccactgcctcatcctcctctccctcaggcctatatgaaagtgtg
accaaacagggagacactgttaggaagcttaaatctgagaaagcacccaaggaccaggtt
gatgctgccttgaaggagctcttagccttgaaggcagagtacaaacaggtgacaggtcac
gactacaagccaggagctgccctagctcctgctcatgccccagtccagagtaacccagct
cccacagccacttctggctcaggcatctatgagcgcgtgactcagcagggtgacctggtg
aggaagctgaagaccgagaaggcccccaaggaccagttggacaccgctgtcaagcagcta
ttgtcactcaaagcggagtacaagcaggcgactggccaggactacaaaccaggcgtggcc
ccagctgtcagccctgcccctgttcaggctagccctgccccccaggaccagtctggttcc
tcccctcaggcactcttcacccaggttgtccaaaagggggagctagtgaggaagctgaaa
tcagagaaggctcctaaggaccaggtggactgtgccgtgaagcagctgctggccctgaag
actcagtacaaggccctcaccggagaggactacaaacctgtggctgccactggagcctcg
agcagagaggacaagaaccgcaaggaccgagagaacaagtctgagaaacaggcaggagga
ggaggaggggggaagaagcagccaaggggagaaaagggcaaggaggcctcattgggaggc
acagggggaggaggagatagtggtcccaagaaacagacaagactggggctggaggctaag
aaggaggagaacctagctgattggtactctcaggtgatcaccaaggcagagatgattgag
tactatgatgtgagtggctgctatgtgctgcgaccctggtcctactctatctgggagtct
atcaaggagttctttgaccgcgagatcaagaagctgggtgtggagaactgctacttcccc
atgttcgtctcgcaggctgccctggagaaagagaagtcccacatagctgattttgcccca
gaggttgcctgggtaacacggtcagggaacactgagcttgccgagcccatcgctgtccga
cccactagtgaaactgtgatgtaccctgcctacgccaaatgggttcagtcccacagagac
ctacctatcaaactcaaccagtggtgcaacgttgtgaggtgggagttcaagcacccccag
cccttcctaaggaccagagagttcctgtggcaggaaggacacacggcgtttgccaccaaa
gaggaggccgcggaagaggtgttacagatccttgacttgtacgcacgggtctatgaggag
ctgatggccatccctgtggtaaagggcagaaagaccgagaaggagaagtttgcaggagga
gactacactaccactgtggaggccttcatctctgccagtggcagagccatccagggtgcc
acatcccaccacctgggccaaaacttttcccggatgtttaacatcgagttcgaggacccc
agaaagccgggcgagaagcagctagcctaccagaactcgtggggcatcaccacccgcact
atcggcgtgcttaccatggtacatggggacaacatgggcctggtgctgccccccagagtt
gcctgtctccaggtgatcatcatcccgtgtggcatcacagcctccctgcctgaggctgag
aaggagtctctgctggcccagtgctccaagtacctggcccggctgcagaggggagagacc
cgggtaaaggccgacctccgagacaattactctcccggctggaagttcaaccactgggaa
ctcaagggcgtgcccattcgccttgaggtgggtcctaaggacctgaagcagggtcagtgt
gtggccgtgaggagagacacgggggagaagatcatcctgcccgaggcagacaccgagaag
agactcatacagctactggaggacatccagaccaacctcttcaagagggcatcggacgac
ctgaacaaacacatggtggtagcagactctatggagcggttccagaaagatctggaccag
ggcaggattgtccagatccccttctgtggaggcatcgagtgtgaagactggatcaagaag
accactgccaaggaccaggatctggagcccggtgccccctccatgggtgcaaagagcctg
tgtatccccttcaagcccctcaagcccctgcagccgggtcagatgtgcgtcagcggcaag
gaggccgcccagtattacaccctgtttggccgcagctactaa
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integrated database retrieval system
