Oncorhynchus nerka (sockeye salmon): 115138297
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Entry
115138297 CDS
T07952
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R-like isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115138297
Spliceosome [BR:
one03041
]
Complex C
Other components
hnRNP proteins
115138297
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RBD_RDR6
RRM_occluded
DUF1866
Motif
Other DBs
NCBI-GeneID:
115138297
NCBI-ProteinID:
XP_029530862
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All DBs
Position
LG12:complement(27270960..27289885)
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AA seq
712 aa
AA seq
DB search
MTFSTTINSIQQDGHVCAVGNPAYQIRARDWRLERRPRQLPSLSIRQCANQNKQEPHLGT
LHICYTVTFSVLLGFVDRRMAAKVNGSSALVKEDEEPMDITVTHTELYQTLIDAGLPQKV
AESLDKIFQTGLVAYTDLDERAIDALREFNEEGALSVLLQFKESDLSHVQNKSAFLCGVM
KTYRQREKQGSKVQESTKGPDETKIKALLERTGYTLDVTTGQRKYGGPPPDEVYSRAQPG
IGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLLSGQNRGYAFITFCNKDAALE
AVKLCDNYEIRSGKYLGVCISVANNRLFVGSIPKNKTRESILEDFSKVTESLMEVILYHQ
PDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNPVTVEWADPVDEPDPEIMAKVK
VLFVRNLATPVTEELLEKTFSQFGKLERVKKLKDYAFVHFEDRGAAVKAMQEMNSKELEG
EEIEIVLAKPPDKKRKERQAQRQPSRTTGYYDYYYYYPAPRMPPQMRGRGRGGRGGYSYP
PDYYGYEDYYDDYYSGGYDYHDYRGGYDDPYYGGYDDVYVPRGRGRVNRGAPLPARGRGP
PHPRGRGGYVQRGAPMGVPRGSRRGRGGPPQLQRGRGIRGARGNRRGNVGGKRKADGYNQ
PDSKRRQTNNQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDSYWQQWK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacatttagcacaacaatcaattccattcagcaggatggccatgtgtgtgctgtcgga
aaccccgcttatcaaatacgtgcgcgcgactggcggttggagaggaggccgcgtcaattg
ccctcgctgtcaattcgccagtgtgcaaaccaaaataaacaagaaccccacttaggaaca
ctccacatttgttatactgtgacattttcagttctcctaggctttgtggatcggagaatg
gcagctaaggtgaatggcagttcagctctggttaaagaggacgaggagcccatggacata
actgtaacacacacagagctctaccagaccctcatagacgcaggccttccacagaaagtg
gcggagagcctggataagatatttcagactggactggtggcttacactgacctggacgag
agagccattgacgccctcagggagttcaatgaggagggagccttgtcagtgttactgcag
ttcaaggagagtgacctgtcacatgtgcagaacaaaagtgcgtttctctgtggcgtgatg
aagacatacagacagcgagaaaagcaaggaagtaaagttcaagaatccacaaagggacct
gatgagactaagataaaggctcttctggaaagaacaggttacactttggatgtcaccaca
ggacagaggaagtatggggggcctccacctgacgaggtgtactcaagggcccagcctgga
atcggaacagaggtatttgtcggcaagatccccagggacctgtatgaggatgagctggtc
cctctgtttgagaaagccggtcctatttgggatctgcgtctgatgatggacccccttctc
tcgggtcagaacagaggatatgccttcatcaccttctgcaataaagatgctgccctagag
gccgtcaagctttgtgataattatgaaatccggtcaggtaaatacctgggtgtctgcatc
tctgtcgcaaacaatcgtctgtttgttgggtcaattccaaagaacaagacaagagaaagc
atattggaagatttcagcaaagtcacagagagcctcatggaggtgatactctaccaccag
ccagatgacaaaaagaaaaatcgtggcttctgtttcttggaatacgaggaccacaagtct
gcagcccaggcccgtcggcgcctcatgagcggcaaggtgaaggtgtgggggaaccctgtt
actgttgagtgggcagacccagtagacgaaccggatccagagattatggcaaaggtaaaa
gtgctgtttgtgaggaacctggccacaccagtcacagaggaactcctggagaaaaccttc
tcccagtttgggaagttggaacgggtcaagaagctgaaagattatgcctttgtgcacttt
gaggacagaggtgctgccgtgaaggcaatgcaagaaatgaacagcaaagaattggaaggc
gaggagatagagattgttctggcaaagcctccggacaagaagaggaaagagcggcaggcc
cagagacagccatccaggaccacagggtattatgattactactactactatcctgctcca
cgcatgccacctcaaatgcgtggcagggggagaggcgggagaggtggatattcataccca
ccggactactacggttatgaggattactacgatgattactacagcggtggttacgactac
catgactacagaggtggctacgacgacccttactacggtggttacgatgacgtctacgtg
ccaagaggaaggggcagggtgaatcgaggtgcccccctccctgccagaggccgaggacca
ccacaccctcgtggcagaggtggctacgtccaaaggggggctcctatgggcgtaccgagg
gggagccgtaggggccggggaggcccgccccagctgcagaggggccgcggcatcagaggg
gccagggggaaccgcaggggcaacgtgggcgggaagaggaaggctgacggttacaaccaa
ccagactccaagcgccggcagaccaacaaccagaactggggctcccaacccattgcccag
caacccctgcaacaaggtggcgactattctggtaactatggttacaataatgacaaccag
gagttttaccaagattcttattggcaacaatggaagtag
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