Oncorhynchus nerka (sockeye salmon): 115138342
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Entry
115138342 CDS
T07952
Symbol
smyd3
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115138342 (smyd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115138342 (smyd3)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
115138342 (smyd3)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
115138342 (smyd3)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115138342 (smyd3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
115138342
NCBI-ProteinID:
XP_029530969
LinkDB
All DBs
Position
LG12:complement(30292570..30516888)
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AA seq
429 aa
AA seq
DB search
MASKFERFASSGKGNGLRATHEIHAGELLYTAEPLAYCVSNTCAKYFCHSCFSRRETLLR
CSQCKVARYCDVTCQKQAWSDHKRECKCLRSLLPRIPTDSVRLAARIIFRLLSPSQTSPG
LCSLEEHESHLCDMGEERREGLSQLSSMLQLYIQQEVPNIMQELPAVDPLSLLAKLTCNC
FTISDGELQEIGVGLYPSMSLLNHDCRPSCMMMFEGETLHLRAARDMRPAEELTISYIGS
LAPTRDRQTQLEEQYHFTCQCQRCTTADMDPMMLCGEEEAWTPLREAIPRLENLQTHGDW
EELLQECSSLLAPMGGAVPAVPDGNVYRLRVTDLALDACINLAQWDRALAYGTITLEPYR
QYYPDPHPAHAIQLMRVAKLQHFLVHLGDAQHTLRLAYDIMKVTHGNQHPLTSDLIRKLE
ECRAELDRA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaagttcgaacgttttgcctcttcagggaaagggaatggtttacgagcaaca
cacgaaatacacgcaggtgaactcctgtatacggcggaacctctagcatactgcgtgtcc
aacacatgcgctaaatacttctgtcacagctgcttctcacggcgtgaaaccctcctgaga
tgttctcagtgtaaggtagcgcggtattgtgacgtcacctgccagaaacaggcatggtcg
gaccataagagggagtgtaaatgtctccgcagcctccttcccagaatccccactgactct
gtccgtctggcagccaggatcatctttagattgttgagtccatcgcagacttctccaggg
ctgtgttctttagaggagcatgagtcacacctgtgtgatatgggagaggagaggagggag
ggtctgtctcagctgagctccatgctccagctctacatccaacaggaagtccccaacatc
atgcaggaactacccgccgtggaccccctcagcctgctggccaagctaacatgtaattgt
ttcaccatcagcgacggggagctacaagagatcggagtgggactctaccccagtatgtcg
ttgctgaaccatgactgcaggcccagctgtatgatgatgtttgagggagaaacactccac
ctccgagccgccagagacatgcgacctgctgaggagttgactattagttacattggttcg
ttggctcctaccagagacagacagactcagctagaggagcagtaccatttcacctgccag
tgtcaacgatgcaccactgcagacatggaccctatgatgctgtgtggggaggaggaggcc
tggacccccctgagagaagccatccccaggttggagaacctacagacacatggtgactgg
gaagagctcttacaagagtgtagttctctgctggctccaatgggtggcgctgtccccgca
gtccctgatggtaatgtgtaccgtctcagggtgactgacttagccctggacgcctgcatc
aacctggcccaatgggacagagcactggcctatggtaccatcaccctggagccttacagg
caatactacccagacccccaccctgcccacgccatccagctgatgagagtcgccaagctc
cagcactttctggttcacctgggggacgcacagcacacactgagactggcctatgacatc
atgaaggttactcacggcaaccagcaccccctgacctctgacctcatcaggaagttggag
gagtgtcgggcggagttggaccgtgcctag
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