Oncorhynchus nerka (sockeye salmon): 115138362
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Entry
115138362 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: rab3 GTPase-activating protein non-catalytic subunit-like
KO
K19937
Rab3 GTPase-activating protein non-catalytic subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115138362
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115138362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAB3GAP2_C
RAB3GAP2_N
ChiC
Motif
Other DBs
NCBI-GeneID:
115138362
NCBI-ProteinID:
XP_029531012
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All DBs
Position
LG12:31912485..31940299
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AA seq
1364 aa
AA seq
DB search
MSCCLFEYCRVQELKAVREFLFQSQQNNNSSADKKGENELAWDDSNWGSWDNPEAKEVGS
GETTGVEEDTAAVSAPWLQDCVVSLSPCSDLMVVAKGSKAVFLSARWQTDDGGREXMTLA
VSWSGTLSTNEGESVSNVICIPLASQKRSSTGRPDWTCIVVGFSSGYVRFYTESGVLLLA
QLLNEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAALVTIDGFSLFQSLRACRNQVAR
AAAAGSEVVQPPPLAYKKWGLQDMDAIVDHSSVGIMTLCVFDQMRNASILGGFHASVKGS
LPAMSQYITVGGGPXTGFYYAIEGSSQPLLSHVALAVASKLTSALFTAASGWLGWKKPNE
EEPTQKQKPKVEPATPLAVRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVMLLDVGRGI
AIRMWKGYRDAQLGWVQVSEGRGESSPSAPLPRRHAQFLVIYAPRRGILEVWGTQQGPRV
GAFTVGKHCRLLYAGYRLMGVNSVTSQGWQLHTQQVCLFDPATGALRTVTVPFHLALSDK
KSERAKDLHLLKRLTTLLKSRELEPDYLESEAQRVLLDIKHPAIKKQALECLLANKNAPV
SCLTNITRLLLASLREKDPEAVDEALLQLCSSQLKLLQLYTDIQQLHSTVEASTDAHTKP
TEVAGVEEELARVSLILQRYTELTSGSRPSVSFAQDSPDASLPVRGFLSQMECEGEEIRV
VPGPDADWTQLGSFLFWGCLIGESPLQKVCDTLQETGISPQHLLSLLLSVWLHREKEVLK
KPKAVRHLHTLLTALSSMKGAVESSWDMQCVSPWWQQVRSACVQSHSAAAALLAAIVAHR
AAKDNITSLAETKFQSEWEAVSLELEQWAVCVRQLEDVLALQTLLCVAPLKGTPGGATPH
CSVKALLEGGRGGIADSVAKWVFRQDLAPEWLKDMLQRRGEAQRTEQPSQPVLREKSQED
ADFNRAAELLVSVCQRFPDSLSPDLLFAHCCWEYVVQWNKYPEEGRYLCCAVEHLKLVSS
PHIQLGISSMMWNTFIVKRFSAAAFLMEKVGKAPKDRLCRRDVGMGDGATTSFLGSCVAL
LQILMEADSGIEEVTPPELCVEEVWGGAEGPASIVELALEQRGIHYPLVQHHCLLATLLH
TAMTFNLRVKPLSLFDSKGKSAFFRELVSIQLMSSGDMDPGLVSLRQEFLLRVLTGWVKT
QSEAGMAPASTRLDLDSGDETWPSLCLDLGTLLQVNPDILRRHLVCELYNHGLDPRAEQV
MLEVEDKDVLGSQLLVLTGQRLSYSLLHTQTQTKPAMELLARLPPTLCTWLKAMDPSELG
CLSVPLSQTSRLVSRLIEILPENHGQYSLALHLLEAVDVLQGED
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctgcctgttcgagtactgtcgggtccaagaactcaaagcagtccgggagttc
ttgttccagagccagcaaaacaacaattcgtcggcggacaagaaaggagagaatgagctg
gcctgggacgactccaactgggggtcatgggataaccctgaggccaaagaagttggaagt
ggggaaaccacgggggtggaggaggacactgcagcagtcagcgccccttggctgcaggac
tgtgtggtgtctctgtctccctgctcagacctgatggtcgtcgccaaaggcagcaaggct
gtgtttctctcagcgaggtggcaaacagatgacggaggcagagagnggatgacgctggct
gtgtcctggagtggaactctcagcaccaacgagggggagagtgtgagcaacgtcatctgt
atacctttggccagccagaagaggagttccacgggtcgaccagactggacatgtattgtc
gtgggcttctcatctggctatgtacgcttctacaccgagagtggggtcctactcctagcc
cagctgttgaatgaggaccctgtcctgaggctcaagtgtcgcacttatgagatcccccgc
caccccggtgtcaccgagcagcatgaggagctgagtatcctttacccagcagccctggtc
accatcgacggcttcagtctcttccagtctctacgggcctgcagaaaccaggtggctcga
gcggcggcagcaggcagtgaggtggtccagcctcctcctctggcctataagaagtggggt
ctacaggacatggatgctatcgttgaccacagcagcgtgggtataatgaccctgtgtgtg
tttgaccagatgaggaatgcgtctatcctggggggtttccatgcctctgtgaagggcagc
ctccccgccatgagtcagtacataactgtggggggaggacctnacacaggcttttactat
gccatagagggcagctctcagcctctcctctcccacgttgctctggctgtggccagcaaa
ctcacatcggccttattcaccgccgccagtgggtggctggggtggaagaaaccgaatgag
gaggagccaactcagaaacagaagcccaaggtggaaccggccacgcccctggcagtcagg
tttggtctcccagactcacggcgtcatggggagtccatctgtctgtccccctgtaacact
ctggctggggtcacggacgactttggcagggtcatgctgctcgacgtggggagaggcatc
gccatccgcatgtggaagggctaccgggacgcccagctgggttgggtacaggtgtctgag
gggaggggcgagtcctccccgtccgcgcccctcccacggcgccatgctcagtttctggtc
atctacgcgcccaggagaggcatcctggaggtgtggggcacacagcagggcccccgagta
ggagccttcactgtcgggaaacactgcaggttgctgtatgcaggctaccggctgatgggg
gtgaacagtgtgaccagtcaaggctggcagctccacacacagcaggtgtgtctgttcgac
cctgctactggagcactacgcactgtcactgtccccttccatctggccctcagtgataag
aagagtgagagagcaaaggatctgcacctgctgaagagactgaccacactactgaagagc
agagagttggaaccagattacctggagagcgaggcccagcgtgtactgctggacatcaaa
caccctgccattaagaaacaggccctggagtgtctgctagccaataaaaatgctccagtc
tcctgtctgaccaacatcacccgactcttactggccagtctcagggagaaagaccctgag
gcggtagatgaagcattgctccagttgtgttcctcccagctgaaactgctccagctctac
actgacatccaacagctgcactctactgtggaggctagcacagacgcacacactaaacct
acggaggttgccggtgtagaggaggagctagcccgtgtctccctcatcctgcagcgctac
accgagctcacctccggctcccgcccctccgtctcatttgcccaggactcccctgacgca
tcacttcctgtacgcggcttcctgtcccagatggagtgtgaaggagaggagatcagggtg
gtcccagggcctgacgcagactggacacaactggggagctttctgttctggggctgtctg
ataggagagagccctctacagaaggtctgtgacacactacaggagacaggcatcagccca
cagcatttactgtctctgctgctgagtgtatggctgcacagagagaaggaagtattgaag
aaaccaaaggccgtcagacacctacacacactcctcactgccctcagctccatgaaaggt
gcggtggagtcgtcgtgggacatgcagtgtgtctccccctggtggcagcaggtgcggtct
gcgtgtgtccagtcacacagtgctgctgctgccctgctggctgcaatagtggctcaccgc
gctgccaaggataacatcaccagcctggccgagactaagtttcagtcagagtgggaggcg
gtgtcgttggagctggagcagtgggcggtgtgtgtgagacagctggaggacgtgctggcc
ctgcagacgctgctgtgtgtggcgcctcttaaaggaacaccagggggcgccacaccacac
tgctcagtcaaagccctgctggaggggggccgaggtggtatagcagacagtgtggctaag
tgggtgttcaggcaggacttggcccctgagtggctgaaggacatgctgcagaggaggggg
gaggcccagaggacagaacagccctcccagccagtgctgagggagaaaagccaggaggat
gcagacttcaatagggcagcagagctgctggtgtctgtgtgtcagcgtttcccagactcc
ctctctcctgacctgctctttgcccactgctgctgggagtacgtggtgcagtggaacaaa
tacccagaggaggggcggtatctgtgttgtgcagtggaacacctgaagctggtctctagt
cctcacatccagctgggcatctcctcaatgatgtggaacacgttcatcgttaaacgtttc
tcagctgctgctttccttatggagaaggtggggaaggcccctaaagaccgcctgtgtcga
cgggatgtgggaatgggagacggtgccacgacatcattcctgggctcctgtgttgcgctg
ctacagattctgatggaggcagactcggggatagaagaggtgacccctccagagctgtgt
gtggaggaggtgtgggggggagcggagggtcctgcctccatagtagagttagccctggag
cagaggggaatccactacccccttgtacaacaccactgtctcctggccactctactacac
actgctatgaccttcaacctccgggtcaaaccactcagtctgttcgacagcaagggtaag
agtgccttcttcagagagttggtgtccatccagctgatgtccagcggagatatggaccct
ggactggtctctcttagacaggagttcctgctcagggtgttgacaggctgggtgaagacc
cagagtgaggcagggatggctcctgcatccacccggctggaccttgactcaggggacgag
acgtggccctctctgtgtctggacctggggaccctgctgcaagtcaacccagacatcctg
cgcagacacctggtgtgtgagctgtacaaccacggcctggacccccgggcagagcaggtg
atgttggaggtggaggataaggacgtgttgggttctcagctgttggttctaacaggccag
aggctgagctactccctgcttcacacccagacccagaccaagcccgccatggagctgctg
gcacgcctcccccccacactctgcacctggctcaaggctatggatcccagtgagctgggg
tgcctgtcggtgcccctgagccagaccagcaggctggtgagccgcctcatagagatccta
cctgagaaccacggccagtacagcctggcactacacctactggaggctgtggatgtcctg
cagggagaggactga
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