Oncorhynchus nerka (sockeye salmon): 115138409
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Entry
115138409 CDS
T07952
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00280
Valine, leucine and isoleucine degradation
one00650
Butanoate metabolism
one01100
Metabolic pathways
one04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115138409
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115138409
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115138409
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
115138409
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
115138409
NCBI-ProteinID:
XP_029531091
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All DBs
Position
LG12:34825226..34835967
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AA seq
334 aa
AA seq
DB search
MAAVMRFGSRMGLQCLSLSRSAAVAQLVQDGASAGKTLPERVKIVEVGPRDGLQNEKTVV
PSEVKIHLIDMLSEAGLSVIEATSFVSPKWVPQMADQVEVMMGIHRRPGVSYPVLTPNLK
GFLAAVNAGAAEVAIFGAASELFSKKNINCSVDESLQRFEVVTKAAKEAGVPVRGYVSCV
LGCPYEGKVSPDKVAQVAKRLYSMGCYEISLGDTIGVGTPGGMTEMLQAVSREVPVNALA
VHCHDTYGQALANILIALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGLGIQ
TGVDLPKLMDAGAFICRSLNKKTSSKVAQATCKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtcatgagatttggttctagaatgggtcttcaatgtttatccttgagtcgt
tcagcagcagtggcacaattagttcaggatggcgcgtctgcagggaaaactctcccagag
agggtaaagatagtggaggtgggacccagggatggcctgcaaaatgagaagactgtcgtt
ccttctgaagttaagattcacctgattgacatgctctcagaggcgggtctttctgtcatc
gaagccacgagctttgtctccccgaaatgggttccacagatggcagaccaggtggaggtg
atgatggggatccacagaaggccaggtgtgtcctaccccgttctgacccccaacctcaag
ggattcctggcagctgtgaatgcaggagctgcagaggtggccatatttggtgcagcctcg
gagctgttcagtaagaagaacataaactgctctgtggatgagagcctgcagcgctttgag
gtcgtcaccaaagcagccaaagaggccggcgtgccagtcagagggtatgtgtcatgtgtg
ctgggatgcccatatgagggcaaggtgtcaccagacaaagtggctcaggtagccaagcgt
ctgtactccatgggttgctatgagatatctctgggtgacaccataggtgtgggtacccca
ggtggcatgactgagatgctgcaggcggtgagcagggaggtgcccgtcaacgctctggca
gtccactgccatgacacctacggtcaggcactggccaacattctcattgctctgcagatg
ggtatcagtgttgtggactcgtcagtggctggccttggcgggtgtccatatgcacaaggg
gcttctggcaatgtggccacagaagatgtggtgtacatgctgcacggacttggcattcag
acgggagtggacctgccaaagctgatggatgctggagcttttatctgtcgttccctgaac
aaaaagacaagctcgaaagtggcccaggccacctgcaaactctga
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