Oncorhynchus nerka (sockeye salmon): 115138491
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Entry
115138491 CDS
T07952
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115138491 (exd1)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115138491 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
115138491
NCBI-ProteinID:
XP_029531236
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Position
LG12:complement(38323242..38372438)
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AA seq
567 aa
AA seq
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MTMDDFQFMDSFKRKRIKLTLKTATFLGIVQRINANKTVILEDVVDVKNGRKFPGVKLFF
GHEILNVEFPNVTKSERDNTSDHRPEGHLTVAEFQPYRKGLILNDDDESHVNFVVIDEFH
EKFGPAMMHIRKQQVIGIGADGVGTFQHERLCWLQIATKNKVYLFDILLLGARAFKNGLS
MILENNHILKVTHDCRSLAGCLMAQFGVNLTNVFDTQVADILCFYTETGGFLPDRVSTLP
KVVSLHLKMSSSQLSSLNIKSLLTKEDKEVWYVRPCPLSLLKVMALSVIHLQPLRLVLLD
ALMADYTGLVDSYLSGSREEPVHMHNIGSSSVLELPRELRELEHTRQKRQKWAVDRYPVT
EQGLLERSNPRPLPPSQNGQGQDTATQRQPDPPVPTAVVPVVPAPGQGPAETPCPSNTLG
ASDLHAMTSALTQEAQQSYRKQPSGGVSPVAKSGAPGLLEIVMDTMAGRGRSLLKDPTPP
ILPVFPSMGRGLALPIPAAQVPKESPGALKTQAPVGRVEVPVPPGPRPSPVQPSENIPGA
GRGLIQKPQCLTSPLSLSFSSFRKSHL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacgactttcaattcatggatagcttcaagagaaagcgcatcaaattgacc
ctcaagactgcgactttccttggaattgttcagcggataaacgccaataaaactgtgatt
ttagaggacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattcttt
ggacatgaaattctcaatgtggaattcccaaatgtaacaaagtctgaacgagataacacc
agtgaccacagacctgaaggtcacctgacagtggcagagttccagccttacaggaagggt
ctcatactgaatgacgatgatgagagccatgtcaactttgtcgtcattgatgagttccat
gagaagtttggtcctgctatgatgcacatccggaagcagcaggtgatcggtataggagct
gacggggtcgggacgttccagcacgagagactctgttggctgcagattgccactaagaac
aaggtgtacctctttgacatcctgttgcttggagcccgggccttcaaaaacggcctgtcc
atgatcctagaaaataaccacatattaaaggtcactcatgactgccggagcctcgccgga
tgtttgatggctcagtttggagtaaatctcaccaacgtctttgacactcaggtggcagat
atcctgtgcttctacacagagactggtggcttcctgccagacagggtcagtaccctaccg
aaggtggtgagcctacatttgaagatgtcctcgtcacaactctcctctctcaacatcaag
tctctgctcaccaaggaggacaaagaggtgtggtacgtgcgtccctgccctttgtccctg
ctgaaggtcatggccctgtcggtgatccacctgcagcctctgagactggtgctgctggat
gccctcatggctgactacacaggcctggtggactcctacctcagcggcagccgagaggaa
cctgttcacatgcataacatcggctcgagcagtgttctggagctgcccagggagctgcgg
gagttggagcacacgcgtcagaagcgccagaagtgggccgtcgaccgctaccctgtcact
gagcagggcctgctggagcgctccaaccccagacccctacccccatcacagaatgggcag
ggccaggacacagccacccaaagacaaccagaccctcctgtccccacagcagtggtgcct
gtagtcccagcaccagggcagggcccagcagagacaccctgtcccagcaataccctgggg
gcctctgacctccatgctatgaccagtgccctgacacaagaggcccagcagagctacagg
aaacagccgtctggaggagtcagcccagtggctaaatcaggagcaccaggactcttggag
atagtgatggacacaatggcaggcagagggaggtccctgttgaaagacccaacaccaccc
attctccctgtgttcccctcgatgggaagaggcctggctctcccgataccagcagcccag
gtccccaaggagagccccggagccctgaagacccaggccccagtggggagggtggaggtg
cctgtccccccaggcccaagacccagcccagtacagccatctgaaaacattcctggtgca
gggagaggcctcattcagaaaccccaatgtctcacctctcctctcagtctctccttcagt
tcatttagaaagagccacctatga
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