Oncorhynchus nerka (sockeye salmon): 115138557
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Entry
115138557 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115138557
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115138557
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115138557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_4
zf-UDP
zf-rbx1
zf-RING_4
RING_XB3-XBAT31
Rtf2
zf-C3HC4_4
zf-RING_11
IBR_1
zf_RING_Vps8
zf-RING_10
Sina_RING
TerY_C
Zn_ribbon_6
zf-RING_6
RNase_II_C_S1
zf-ANAPC11
TRAF3_RING
HypA
Motif
Other DBs
NCBI-GeneID:
115138557
NCBI-ProteinID:
XP_029531357
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All DBs
Position
LG12:complement(40931365..40940193)
Genome browser
AA seq
206 aa
AA seq
DB search
MHSSDTTAIHPGLNPKVSVRKAEQDRIEIPDTRCSNNTNEGTADSSNTSYLDTIEVLESS
DPLVAEEEMVDLTYQVFPSSFVDLTNNNDSIVVVDEGPKRRRDWESYVLSSDEEEAAVIV
PDSPATAPLSTAPEPSSTARSTPTTISCPICMDTFGEIIDGGRMVVSSQCGHLFCNTCIR
DSLAKSQTCPTCRKKLNHQQYHQIYI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcagcgacactactgcaattcatccaggtttgaacccgaaagtatctgtcaga
aaggctgagcaagatagaatagagatccctgataccagatgctccaacaatacaaatgaa
ggcacagcagacagcagcaacacgtcataccttgataccatagaggtgctggagagcagt
gatcccttggttgcggaagaggaaatggttgatttgacctatcaggtttttccatcatct
tttgtggacctcaccaacaacaatgactcaatagtggttgtagatgaaggtccaaagcga
agacgtgactgggaaagttacgtgctgagcagtgatgaagaagaggcagctgttattgtt
cctgacagtccagcgacagcccccctctccactgcccctgagcccagcagcacagccaga
tcaaccccaacaacaatcagttgtcccatctgtatggacacgtttggagagataattgat
ggtgggagaatggttgtctcctcccagtgtggtcacctgttctgcaacacatgcatacgt
gactcacttgccaaatcacagacgtgcccaacctgcaggaagaaactgaatcatcagcag
tatcatcaaatttacatataa
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