Oncorhynchus nerka (sockeye salmon): 115138578
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Entry
115138578 CDS
T07952
Name
(RefSeq) estrogen receptor beta-like
KO
K08551
estrogen receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115138578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115138578
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115138578
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115138578
Nuclear receptors [BR:
one03310
]
3. Estrogen like
3A. Estrogen receptor
115138578
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
115138578
NCBI-ProteinID:
XP_029531408
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Position
LG12:complement(41829637..41870154)
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AA seq
554 aa
AA seq
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MACFPGSGTDTSPLLQVQKVGSNKAPGLLPPIYSPLSGMESSSLCIPSSHTGSSHDYSPV
AFYNHSTLGYSRPTISDSYSLCPPLSPHLFWPPNDHSQHNMPLLTQHCPQPLLYSNPNHH
APFEEPNPHNLNLTPSSPLLHPTKLPGESFCAVCNDYALGYHYSVQSCEGCKAFFKRSIQ
GHKDYVCPGTNQCTIDKNLRKMCRSCRLRKCYEVGMKKCGMRPERYSYMGARHRRVPQGR
EAPGGLVGVGARAQWNLEGGSLPLLEVHHSSLTPEQLISCIMDVEPPEIYLMEDLKRPFT
EASMMMSLIKLANKELFLMISWAKNIPGFVELSLTYQMHQLESGWLDVLMLGLMWRSVDH
PGKLIFSEDLKLNREEGNCVEGIMIIFDMLLAATTRFRELNLQREEYVCLKAMILLNSNI
CSTSPEMAEDLESKGKLQLLLDSVTDALVWAISKQGLSFQLQSTRLSHLLMLLSDICHAS
GKGINHLSGMKNNNIVQVSDLLLEMLTNTCHRSRMSTPLDPSNHDLTVLPAAQAPAPTQA
SASAVEPQFQPHSL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttttcctgggagtgggactgacacttctcccctgctccaggtccagaaggtg
ggctccaacaaggcccctggactcctgccccccatttacagccccctcagtggcatggag
agctccagcctctgcatcccctcttcccacacaggcagcagccatgattacagccctgta
gccttctacaaccactctacgctgggctacagcagaccaaccatctccgacagctactct
ctgtgtcccccactcagtccccacctcttctggccccccaatgaccacagccagcacaac
atgcccctgctgacccagcactgtccccaacccttgctgtacagcaatcccaaccaccac
gccccctttgaagagcctaatccccacaacctcaacctcacccctagcagccctctcctc
caccctaccaagctgccgggggaaagcttctgtgccgtatgtaatgactacgctttgggc
taccattacagcgtacagtcttgtgagggctgcaaggccttcttcaagaggagtatccaa
gggcacaaggactacgtttgtccagggactaaccagtgcactatcgacaagaacctccgt
aaaatgtgccggtcctgccgcctacgcaagtgttatgaagtgggcatgaagaagtgtggt
atgaggccggagcgctacagttacatgggggcgaggcacaggcgtgtgcctcaggggcgg
gaggcaccaggcgggctggtgggggtcggtgccagggcccagtggaatctggaggggggc
tccctccccctgctggaggtgcaccactcatccctgacccctgaacagctgatatcctgc
atcatggatgtggagccgccagagatctacctgatggaggacctaaagaggcccttcact
gaagccagcatgatgatgtcactcatcaaactggccaacaaggagctgttcctcatgatc
agctgggccaaaaatatccctggctttgtagagctgagtctgacgtaccagatgcaccag
ttggagagtggctggttggacgtgctgatgcttggtctgatgtggaggtctgtcgaccac
cctgggaaactcatcttctcagaagacctaaagctcaacagggaagaggggaactgtgtg
gagggaatcatgattatatttgacatgctactggcagccaccactaggtttcgagagctg
aacctccagagagaggagtatgtctgtctgaaagccatgatcctcctcaactccaacata
tgctctacctctccggagatggcagaggatctggagagcaaggggaagctgcagcttctg
ttggactcagtgacagatgccctggtgtgggccatctccaaacaaggcctgtccttccag
ctgcagtcaacccgcctttcccacctcctcatgttgctctcagacatctgccacgccagt
ggcaaaggcataaaccacctctccggcatgaagaataacaatattgtgcaggtctccgac
ctgctcttggaaatgctcaccaacacatgccacagaagccgtatgtccacacctcttgac
ccctctaatcacgacctcaccgtgctcccagcagcccaagcccctgcccctacccaggct
tcagcctctgctgtggaaccccagttccagccacattccctatag
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