Oncorhynchus nerka (sockeye salmon): 115138579
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Entry
115138579 CDS
T07952
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115138579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
JAG1
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
115138579
NCBI-ProteinID:
XP_029531409
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All DBs
Position
LG12:complement(42020025..42055734)
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AA seq
1245 aa
AA seq
DB search
MWNCMGISKCLSIVCLLMVWTEVSQSSGSFELQLIAVQNANGQLSDGDCCDGERNAQDLH
CSRDECDTYFRVCLKEYQTEVTTSGLCIYGTGSTNVIGGNTFQFKSTKNNQNRINDGGKI
VIPFQFAWPRAYTLIVEAWDWDNGTHSSSGEDLLIERSVRKGMINPGDDRQTIQHNGPTA
NFEYNIRVRCDENYYGNKCNKQCRPRNDDYGHYVCDQFGNRGCLEGWMGPYCTAAICKQG
CNLLQGFCNAPGECMCKYGWQGPFCDDCLPYPGCVHGTCVKPWLCSCEKNWGGLLCDKDL
NYCGTNKPCKNGGTCMNSEPDEYNCACSDSYSGKNCEIVEHSCVSNPCANGGTCHEIPSG
FECHCPAGWSGPTCAKDIDECASNPCGQGGTCIDMENGFECLCPPQWAGKTCQIDANECM
GNPCLNAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGLCQNGATCKEGRRGYVCACSP
GSVGRHCEVQRNSCVSGPCRNGGRCHTLLDGFMCECPHGYTGTTCEVQSNPCSPNPCQNK
AQCHSLMEDFYCACPDDYEGKTCSELKDHCKTNPCEVIDSCTVAVATNDTQEGVWYISSN
VCGPHGRCISQPAGNFTCSCEPGFTGTYCHENVNDCVSSPCKNGGTCIDGISSFQCFCPD
GWEGTLCVMDVNECSRNPCKNGGRCVDLVNDFYCQCQDNWKGKTCHSRESQCDSSTCSNG
GTCFDHGDTFRCTCLSGWGGSTCNTGKNSTCDSNPCENRGTCVGGGDAYTCICKDGWEGP
TCAQNTNDCKTTPCYNSGVCVDGVNWFRCECAPGFAGPDCRINIDECQTSPCAYGSTCVD
EINSFRCVCPLGWAGPRCQEFIGIGKACRYSGLQFPHGSQWEEECNTCQCVNGSVRCSKV
QCGRRPCLLHRVASGPDSIAPCPRGQECVEHKFLTCFAPPCHQWGVCSTPDPPPALHTQC
EPNCGYLDNSCARITLIFNRDKVPQGTIVENICLELRYLPITQTLAKERTLLILCDLSYS
NSDAVEVAMSYDQDGQERDGNRDQIQEAASAIIGALSKRHNSTVMLAVVEVKVETQVMSQ
SVDHLVPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESAVEDSTVNNLLEPLRVILPQR
IDNLDKDIQYECKKLMSPPDRTCDGAEGEEEEELRRGRMELDKCSTQKCSLAGVQDRVMC
KGGVICTMRSTPVKTPHRTVHSPKDNRCKNLSAANFSEDVKDHYV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatttcgaagtgtctgtcaatagtgtgtcttctgatggtgtgg
actgaggtgtcccagtcttcgggctcttttgagctgcagttgattgctgtacagaacgct
aacggtcagttgtcggacggggactgctgcgacggtgaaaggaacgcgcaggatctccac
tgtagcagggatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacggag
gtcacgacctcaggcttgtgcatctatggaactggatctactaacgttatcggtgggaat
acttttcaatttaagagcaccaaaaacaaccaaaaccgaatcaacgacggtggaaagatt
gtcatcccattccagttcgcttggccgcgggcatacactctgattgtggaagcgtgggac
tgggacaatggtacacacagcagcagtggtgaggatctgttaattgagcggagtgtccgt
aaaggaatgatcaaccctggcgatgacagacagactatccaacacaacggtcctacagcc
aactttgagtataacatccgtgtgcgctgtgacgagaactactatggcaacaagtgcaac
aagcagtgccggccacgcaatgatgactatggccactacgtgtgtgaccagtttgggaac
agaggctgtttggagggctggatggggccttactgtacagctgctatctgcaagcagggc
tgtaacctgctgcaaggattctgcaatgccccaggagaatgcatgtgtaaatacggttgg
cagggtccgttctgtgacgactgcctgccctacccaggctgtgtccatgggacctgcgtc
aagccctggctgtgcagctgtgagaagaactggggaggcctgctgtgtgacaaagatttg
aactactgtgggacgaacaagccgtgtaagaacggaggaacgtgtatgaactcagagcca
gatgaatacaactgtgcctgttctgacagctactcgggcaagaactgtgagatagtggaa
cactcatgtgtgtccaacccttgtgccaacgggggcacctgccatgagatcccgtctggg
tttgagtgccactgtcctgcaggctggtcagggcccacctgcgctaaagacatagacgag
tgtgcgtctaacccctgtggtcagggtgggacctgcatcgacatggagaacggatttgag
tgcctctgccccccacagtgggctgggaagacctgccagatagacgctaatgagtgtatg
gggaacccatgcctcaatgcttactcttgcaaaaacttgattggtggatatcactgtgcc
tgctttcgaggatgggccggccagaactgtgacatcaatgtcaacagctgccatggactg
tgtcagaatggagcgacttgcaaggaggggcgaagaggctacgtgtgtgcctgctcaccg
gggtctgtgggccggcactgtgaggtccagaggaacagctgtgtcagtggcccgtgtaga
aacgggggcaggtgccacaccctgctggacggcttcatgtgtgagtgcccacatggatac
actggcactacctgtgaggtgcaaagtaacccgtgcagccctaacccttgccagaacaag
gcccagtgccacagtctgatggaagacttttactgtgcctgtcctgatgactatgagggc
aagacctgctctgagctcaaggaccactgcaagaccaatccctgtgaagttattgacagt
tgtactgtcgctgtggccaccaacgacacacaggaaggggtgtggtacatctcgtccaat
gtgtgcggcccccacggacgctgcatcagccaacctgctgggaacttcacctgttcctgt
gaaccgggcttcactggaacatactgtcacgagaatgtaaacgactgtgtgtcgtctccc
tgtaagaacggaggaacttgcatcgacgggatcagctctttccagtgcttttgccctgac
ggctgggagggcacgctgtgtgtcatggatgtgaatgagtgcagtaggaacccctgtaag
aacggaggtcgctgtgtggacctggtcaatgacttctactgtcaatgccaggacaactgg
aagggcaagacctgccactcacgtgagagccagtgtgactccagtacctgtagtaatggg
gggacgtgctttgaccacggggacacctttcgctgtacctgtttgtcagggtggggcggc
agcacctgcaacacaggcaagaacagcacgtgtgactctaacccatgtgagaacagaggg
acctgtgtcggagggggtgatgcctacacctgcatctgcaaggatggctgggaggggccc
acatgtgctcagaatactaatgactgcaaaactaccccctgctataacagtggtgtctgt
gtggatggtgtgaactggttccgctgtgagtgtgccccaggattcgctggaccagactgc
cggatcaacatagatgagtgccagacgtctccctgtgcctatggttctacctgtgtggat
gagatcaacagcttccgctgtgtgtgtcccctgggctgggctgggcctcgctgccaagag
ttcatagggatcgggaaggcctgtcgttactccggcctgcagttccctcatggcagtcaa
tgggaggaggagtgtaatacctgccagtgtgtcaacggcagtgtgcgctgttctaaggtg
cagtgtggccgacggccctgtctgctccatagagttgcttccggtccagacagcattgcc
ccctgtcctagaggacaggagtgtgtagagcacaaattcctcacctgctttgccccgcca
tgccaccagtggggcgtgtgttctacccctgaccccccaccggccctccacactcagtgt
gaacccaattgtggttatttggacaacagctgtgcccgcatcacactcatcttcaataga
gacaaagttccacagggtaccattgtggagaacatctgtttggagctgaggtaccttccc
atcacccagaccctggctaaggaacgtacgctcctcattctctgtgacctgtcctactcc
aacagtgatgccgtggaggttgccatgtcttatgatcaggatggtcaggagcgggatgga
aaccgtgatcagattcaggaggctgccagtgccatcatcggtgccctgtccaaacgacac
aacagcactgtcatgctggccgtggtggaggtcaaagtggagacgcaggtcatgtcccag
tctgtggaccacctggtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttctgc
atcgtggtgtgtgtgtggtggacccgtaagaggaaaaaagagcgtgagagagagtctgca
gtggaggacagcactgtcaataaccttctggagccactgagggtcatcttgccacagcgc
atagacaacctagacaaagacattcagtacgaatgcaagaaactcatgagccctccagac
cggacgtgtgacggggctgagggagaggaggaagaggagctgaggaggggaaggatggag
ctagacaagtgctccacacaaaagtgctcattggcaggagtgcaggacagagtgatgtgc
aaagggggggtgatctgtacgatgcgtagcacccctgttaaaaccccccaccggacagtg
cacagtcccaaagacaaccggtgtaaaaacctcagcgctgccaacttcagtgaggatgtc
aaagatcattatgtatga
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