Oncorhynchus nerka (sockeye salmon): 115138580
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Entry
115138580 CDS
T07952
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115138580
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
115138580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
115138580
NCBI-ProteinID:
XP_029531412
LinkDB
All DBs
Position
LG12:complement(42179897..42245852)
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AA seq
671 aa
AA seq
DB search
MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGLYTGVGRESRAQTLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
RLTRGRRVAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIDDVQGEIHEYQDEIEMELEQSRPKLRGMYASCAKSGPQEEEDDEIS
LPDGEEREDEELKAVAQHLNKELCDQVISGEEDGEGQEERPPRRGPSLASLLGPMPTAAS
LGLPESISKCIGEEKENDEDAENGELDLSGIDDDEIELYLLNDKEVKIKTELWLKQNEDY
LKEQKEKEERIAKEKELGIYKDKKPKTSKKRAPIHASTADEAIEKMLEQKKISTKINYDI
LKELNVKPCASPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSSLGKRLRPFIS
GLPPKKLALDKIAIPLPVASEVSPHSVLVESGPVVYDDVADEEEEDEEEPCVSAMELLGG
NEYGCDDDDGF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagagtgtgtaagaactgtgggggcacagacatcgatgtggaccaggccaga
ggcgatgcggtgtgcgtgggctgtggctcggtcctggaggacaacattatcgtgtccgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctctggaaggaaccccacttttggggaagggctctatacgggcgttggaagggag
tcccgggcccagaccctgcagaacgggagacgtcagatcaacacactgggccaccagctg
cagctgaaccagcactgcctggacacagccttcaacttctacaagatggccgtgtgtaaa
cgcctgacacggggtcgaagggtggcccacgtggtggccgcatgcctctacctggtctgc
aggacggaaggaacacctcacatgctgcttgacctcagtgacctcctgcaggtaaatgtt
tacgtcctgggtagaaccttcttagtcctggccagagagctctgcatcaatgcccccgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggagtttggagagaagaac
catgaggtgtccatgacagcactgcgactgctgcagaggatgaaaagggactggatgcac
acgggacggagaccctcaggactgtgtggcgcagccctgttggtcgctgctcgcatgcac
gagttccgccgtaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
cgaaagagattgaatgagtttgaggacacgcccaccagccagctgaccattgaggaattt
atgaaagtggatcttgaccaggagtgtgacccgccctctttcatcgctggccagaggaag
aaaagaatgaagctgcttgaggaagaattggagaagaagattgatgatgttcaaggtgaa
atccatgagtaccaagatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctgtgcaaaatccggcccccaggaggaagaggacgatgaaatatct
cttcctgatggggaggagagggaggacgaggagctaaaggctgtggcccagcacctcaat
aaggagctgtgtgaccaagtgatctctggagaggaggatggagaggggcaggaggagaga
cctccacgcagaggcccatcactggcctccctcctggggcccatgcccaccgcagccagc
ctcggcctcccagagtctatcagcaagtgcatcggagaggagaaggagaacgatgaggat
gctgaaaatggagagctggacttgagtggtattgatgatgatgagattgagctgtatctc
ctgaatgacaaagaggtgaaaatcaagactgagctttggctgaaacagaatgaagactac
ttgaaagagcagaaagaaaaggaagagaggatagcgaaagagaaggagctggggatttac
aaggacaagaagcccaagacctccaagaagcgggctccgatccatgccagcacagccgac
gaggccatagagaagatgctggagcagaagaagatctccactaagatcaactacgatatc
ctgaaggagctgaatgtcaagccatgcgccagtccagcccgccagacagcagagtctccg
aaaggagccacccctggagcccagaggctgactggacgataccgcaaacccaccaatgtc
cctctgagcctgggcacacccctcagcagcctgggcaagaggttacggcccttcatatca
ggactcccccctaagaagctggctctagacaagatagccatccccctgccagtggcctct
gaggtgtcgccccactctgtgctggtcgagagtgggcctgtggtctatgacgatgtggca
gatgaggaagaggaggatgaggaggagccctgcgtcagcgccatggagctgctgggaggc
aacgagtatggatgtgatgatgatgatggtttctag
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