KEGG   Oncorhynchus nerka (sockeye salmon): 115138599
Entry
115138599         CDS       T07952                                 
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115138599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115138599
   03400 DNA repair and recombination proteins [BR:one03400]
    115138599
Spliceosome [BR:one03041]
 Complex B
  Other components
   Prp19 complex
    115138599
 Complex C
   Prp19-CDC5 complex
    115138599
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115138599
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 115138599
NCBI-ProteinID: XP_029531476
LinkDB
Position
LG12:42675446..42685200
AA seq 744 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEERERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLSNSAMTTGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGGMTPQGALTPKGPGTVTPGVTPGRTPLRDKLNINSEEQLADPAYARHLQRESREQL
KLGLMSLPIPKNDFEIVLPENAETELEEMETETGYMEDASEIELRNRAARDAEQEKELKL
RHTAVQRILPRPSEVNESILRPLGTDPLSELQQAEEIIKKEMITMLHFDCLHHPPANQQR
SKQRGPASTSNNAEHIAHLDRHPYKPISNEELAHASELLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSCAVGLLKQHGELWEQ
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgccgcgtatcatgatcaaggggggtgtatggcgaaacaccgaggatgaaatactgaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaaacagtgcaaggcccgctggtatgagtggctggatcccagcattaagaaa
accgagtggtccagagaagaagaggagaagctgctccatctggccaagcttatgcccacc
caatggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagtttctactagacaaagcagcccagagggacaatgaggaggatacagctgatgatccc
aggaaactgaagcctggagagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggatatggacgaagatgagctggagatgctgtctgaggccagagctcgtctggcc
aacactcaggggaagaaagccaagaggaaggccagagagaaacagctggaggaggccaga
cgactggctgctctacagaagcgcagggagttgagggcagcaggcatcgacgctcagaag
aagaggaagaagaagagaggagtggactacaatgctgagattccctttgagaagaaacct
tctcagggtttctatgacaccagcatggagctctatgaaggtctggaaccaaacttcaaa
cgcctgagacaacaacacctggacggagagctacgcaatgagaaggaggagagggagagg
aagagggatagacagaagatcaagaagaagaaggaaagtgatcttccgtcagccatcctc
cagactagcggagtagcggagttcaccaagaaacgcagcaaactggtgctgcctgcacca
cagatctctgatgcggagctggaggaggtggttaagctgggtcaggccagtgaagtggct
cgtcagaccgctgaggaatctgggatcactaactccgcctcctcagccctactgtcagaa
tacagcctttccaacagcgccatgacaactgggctacgcacccccaagacccctgccgcg
caggacaagatactacaggaggcccagaacctgatggctctaactaacgtagacactcct
ctgaaaggaggtctgaacactcctctccaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacaccgaatactgtactgaccacacctttcagaaccccgggtcca
gggtctgagggcggtatgaccccccagggagcattaacccctaaaggaccgggtactgtg
acccctggagtaacccctgggcgcacccctctacgagacaaactcaacatcaatagtgag
gaacaactagcagaccctgcctacgctagacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccgatccccaagaacgactttgagatcgttctaccagaa
aacgcagagactgaactggaggaaatggagacggagaccggatacatggaggacgcctca
gagatagagctacgcaatcgggctgcccgggatgcagagcaggagaaagagctgaagctg
agacacactgctgtacagaggattctacccagaccatcagaggtgaatgagtctatcctg
cgtccgttgggaacagatcctctgtcagaactgcagcaggctgaggagattatcaagaag
gagatgatcactatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggcctgcctccacctccaacaacgcagaacacattgcccacctggac
agacacccctacaagccaatcagcaatgaggagctggcacatgccagtgagttgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgcccagagccgctac
accagggccaacctggcctccaagaaggaccgcatagactctctggagaagaaactagag
atcaaccgaggccacatgacgtgtgaggcccgtcgcgctgctcgtctggagcgtcgtctc
aaggtgttactaggagggtaccagtcctgtgctgtaggtctactgaagcagcatggtgaa
ctgtgggaacagtga

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