Oncorhynchus nerka (sockeye salmon): 115138615
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Entry
115138615 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115138615
04082 Neuroactive ligand signaling
115138615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115138615
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115138615
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
115138615
NCBI-ProteinID:
XP_029531514
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Position
LG12:43165233..43220847
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AA seq
486 aa
AA seq
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MCTALDRGRWGIFCLFLMVAMVCGAQSANEQSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAQTNNENKNRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVY
WLYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacggctttggaccgcggacgctgggggattttttgtcttttcctcatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcaaagcaacatgtcatttgtgaaagcgacc
gtcgacaaactgctgaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggcatgagcatagatatcgccagtatcgacatggtttcggaagtcaacatg
gattacaccatcactatgtacttccaacagtcctggagggacaagcgcttgtcatacaca
gggattcccctcaacctgacactggacaacagggtggcagactcactctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatg
atccgacttcatcctgacggaactgtgctctacggcctcaggatcaccactactgcagct
tgcatgatggacttgcgtagatacccactggatgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaactgccccaattctctataatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctcgaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggcataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tacgtcaaggctatagacatctacctgatgggctgcttcgtgttcgtcttcctcgctctg
ctggagtacgcctttgtcaactacatcttcttcggacgggggcctcacttgcagaaaaag
gtggcagagaaagcagctcaaaccaataatgaaaataagaaccgattggagagtaacaaa
gtgcaggtggacgcccacggcaatatcctcctgaccaatctggagatccgtaacgagatg
ggcgggatgggtggcatggccgggatgaccggggctgaaatgataggggctctcaatgac
ccgcgggccaccatgttctcctacgacagcgccagcatacagtaccgtaagcccatggcc
agccgagacctgtacggtcgaccagccctcgaccggccagtcggccacaagaagagtcgt
ttgaggaggagggcatcgcagctcaaagtcaagatccctgacctgacggacgtcaacgcc
atagacaagtggtcccgtgtcatcttccctatcgccttcaccttcttcaacctggtctac
tggctgtactacgtccactag
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