Oncorhynchus nerka (sockeye salmon): 115138667
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Entry
115138667 CDS
T07952
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115138667
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115138667
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
115138667
NCBI-ProteinID:
XP_029531629
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Position
LG12:47482564..47529717
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AA seq
790 aa
AA seq
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MEKLLVCLLVIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFAPPNIDRHTVELRLAD
NFITSIKRKDFANMTRLQDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLATLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNSPSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVVLRCKARGDPEPAIHWISPEGKLVANSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSTDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTTNSGKGTLVTNVHSQTNGAQSQGCSVTPSVSKQAMGGSDGGG
GGCLKAVGHASDTLTHSSETSLPDCSTATSQVTQSWNTPGSSGSLKPKRKPAPKPYAAAA
TPEPNIEALPNAETQNTNRNNSTALEQPCAPVFHSPLPFSSVKDTPILRRAHPRPSSKYL
TLPVEGVRAKRRYSLNEDSSKHHCYVGTTQFGNMWSKRSMSMNGIVLQQEDIDSVKATFS
SSEWILESTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttatcggaatagcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaacctcgcaaccctctgtgccaaaaaa
gggctcctctttgcccccccgaacattgacaggcacactgtggagctgcggctggccgac
aacttcatcaccagcatcaaaaggaaagactttgccaacatgaccaggctgcaggacctt
accctgtccaggaataccattagcttcatcacgccgcatgcattcgctgacctggagaac
ctccgcgccttgcacctgaacagcaaccgtctaacccggatagccaatgacaccttcagc
ggcatgtccaaactgcaccacctcatcctcaacaacaaccagctgacgttgatccacctg
ggggccttcaatgacctgctggccctggaggagctggacctgtcctacaacaacctggag
tccatcccctgggaagctatccagaggatgaccagccttgccaccctcagccttgaccac
aacatgatcgactacattcctgaggggaccttctctcttctccaaaagctcaaccgcttg
gacgtgacctctaataagttacagaaactccctcctgatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaactctccctcgttcgcgctgagctttggtgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagtcgagaggatgatctg
gagacatgcgcctcaccgcagcatctctccggacgctacttctggtctatacctgaggag
gagttcctgtgtgaacctcctctcatcacccgccactcccatgagatgcgggtgctggaa
ggccagagggtggtcttgaggtgcaaggcccggggggaccctgagcctgccatacactgg
atctcaccagaggggaagctggtggcaaactcctcccgaacgcttgtgtacaccaacggc
accctggatattctgatcagcacagtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcaggtgaggcacatcagactgtggagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcctcggacatctccacatcc
accagggctggggccaacggcagcaaccacactggagacaccaaaactagcacagataaa
cgggtggtcatcgccgaggccacgtcctccactgcgctgatcaagttcaacttccagagg
aatatacctgggatccggatgttccagattcagtacaatggcagttatgatgactctctc
gtttacagaatgattccccccacaagcaaaaacttcctagtcaacaacctggctgctggg
acgtcttacgacctgtgtgttctggccatctacgacgacggtatcacctcactcaccgcc
acccgcgtggtgggctgtgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggtggcatcatcgtggcc
tctgtcctcgtcttcatcatcatcctcatgattcgctacaaggtctgcaacaccactaac
tcgggcaaaggcacccttgtcaccaacgtccactcacagaccaacggggcgcagtctcag
gggtgcagtgtcacaccctctgtgtccaagcaggccatgggagggtcagacggagggggt
ggaggatgtctaaaggctgttggtcacgcgtcagacacgctaacgcactcgtccgagacc
tctctcccagactgctctactgctacgtcccaggtgacccaaagctggaacacacctgga
tcctcagggtctctgaagccaaagcgcaagcctgcaccaaagccctacgctgctgctgcc
acccctgagcccaatatagaggccctccccaacgctgagactcagaataccaaccgcaac
aactccacggctctggagcagccgtgcgccccagtattccactcccccctacctttttcg
agtgtcaaggacacccccatattgagacgtgcacaccccagaccctcctccaagtacctg
accttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgaggactcgtcc
aagcaccactgctatgttgggacaacacaatttgggaatatgtggtctaagcggagtatg
tccatgaacgggattgtacttcaacaggaagatatagacagtgtgaaggcgaccttttcc
agttcagagtggattctagaaagcactgtgtga
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