Oncorhynchus nerka (sockeye salmon): 115138704
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Entry
115138704 CDS
T07952
Name
(RefSeq) AT-rich interactive domain-containing protein 4A-like isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115138704
03036 Chromosome and associated proteins [BR:
one03036
]
115138704
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
ARID
115138704
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115138704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
115138704
NCBI-ProteinID:
XP_029531694
LinkDB
All DBs
Position
LG12:49558816..49617090
Genome browser
AA seq
1394 aa
AA seq
DB search
MKAADEPAYLTVGTEVSAKYRGAFCEAKIKTVKRTVKVKVMLKGDTTSQVVQDDQVKGQL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHANDDKESSSSDDDSEDRRRLNDDLLGKVA
SIQTGTDQTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFRTVARKEIHEVNMDSISK
AEFSSRNGLDEAVHFLKTKVVPDSWKMDMSEILESSSSDEEEDKEGKDSEEEEEEEEEKE
DDEQPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYQQGGCDK
IESGSVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTIHHNEARPA
PQSSQTEQKAAQVPEVKVKDKDKVGKGPTPPVQNESAAATEDKPSQEEAASGSESDKESH
KDIASPRGRRRCTVTPVKAEVKEPVKLEKIKEQEPSGLGVGETSGEETGGQKESSRSDGG
DTQGNGCSRRLEETDKESEDEGEDEDGERRVEGAEDEDSEDSVTGTKVKVKYGRGKTQKI
YEANIKKTENDDAGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKNKQKKKVMNKED
GEKDKQGKLGGLRGRPLLRTTPPSANRSVSKTPSREGRSSSKSKSDTSPLPNGEGTPRRR
TRRTSGMYDSDRDANSNDESGNSSEDSESEDSPEKKPAWAERTDPATARKQEEEEDLRVE
RGRAVAAAAAQAAAAAAQLQPPSSPKEKEQQQEDKLPEREPEKEEAEEQLQTPPMTPEPD
RPKEEDTPNLKSPRPKASRRSNVREPERNTNITGSEIPTTPNHTETESFPSPCPLKRQDE
PMVVLHCLSAEHLPSMPDLPIMDSDTDSAPEEEICREERGVAKRKATDHRTPDKKVRLDW
REDTARMASPGARPHDSPGARPHDSPGARPHDSPGARPHDSPGARPTTPERRLESGGLKE
EECLKPAKGKTEPEVKTEMPALTPEVRCRGLGEGGVAGGQPRSEQPDYGAEEELMPQIGP
EALVCHEVDLDDLDEKDKTSAEDLLMMMSQGKVHAPPPSNASSHHPQTHNNPPPSSGGAA
PPQVFSPTSAPSPDESISTKSESDVTIEVDSVAGESQEGLGDNESANSNCFEANTSSSNS
SMSLQERDTKDRGQKRLMDCNMSCSAKKQKRNQKRPSTTSKMEKNGAEYSSDSEDLAVMD
PSCKMTPVKHSMSKGSLKLVSPNSKELEKDKHKHKQSSFPSPRTYKWTFQLNELDSMTSA
ERISFLQDKLQDIRKYYMSLKSEVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPS
SASPTQNTVAVECR
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcggacgagcctgcctacctgaccgtggggacagaggtcagcgcgaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggacggtgaaggttaaggtg
atgctcaaaggagacactacctcacaagttgttcaagatgaccaagtgaaaggacagttg
agggtgggctccacagtagaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaacttacagacgccagttggtacacagtggtgtttgacgatggagatgagaagaca
ctccgcaggacgtctctgtgtcttaagggcgagagacattttgctgagagcgagacgttg
gaccaactgccccttaccaacccggagcactttggcacccccgtcatcgggaagaaggga
aaccgcggaggaaggaggtcatctcaggctcatgcgaacgatgacaaggagtcgtcgtcc
agtgatgacgacagtgaggataggaggaggctaaatgatgacctgctgggtaaagtggcc
agtattcagactgggacagaccagacatcctggtacctggccctggtgatatcacccagc
tgcaatgatgacctgacagtcaagaaagaccaatgtttagtgagatcatttgcagactcc
aaatttcgcactgtggcaagaaaggagatccatgaagtgaacatggacagcatctctaaa
gctgagttctcatcgaggaacgggttggacgaggcagtgcatttcctcaaaaccaaggtg
gtccctgacagttggaagatggacatgagcgagatcttagaatcttccagcagtgacgag
gaggaggacaaggaaggaaaagatagtgaagaagaggaggaggaggaggaggagaaggag
gatgacgagcagcctgaggatgaggcggatccagaggagagggatcacttcctgcagcag
ttgtataagttcatggaggatcgagggacaccaattaacaagcctcctgtgctcggctac
aaggatctgaacctcttcaagctcttcaggctagtctaccagcaggggggctgtgacaaa
attgaaagtggatctgtgtggaaacaaatctacatggacctgggcattcccatcctaaac
tctgctgcctcctacaatgtgaagactgcctacagaaagtacctgtatggctttgaggag
tactgccgctcagcctgcatcgtgttcaggaccatccaccacaacgaggctcgtccagcg
ccccagtcgtcccagacagagcagaaggctgcccaggtccctgaggtgaaggtgaaggac
aaagacaaggttggcaagggcccaacaccacccgtccagaatgagtctgctgcagccaca
gaggacaagccttcccaggaggaggctgcgtcggggagtgagagcgacaaagagagccac
aaagatatcgcctctcccagggggaggagacggtgcactgtgaccccggtcaaagctgag
gtgaaggagcctgtcaagctggagaagatcaaagagcaggagccgagtggtctgggtgtg
ggcgagaccagcggagaggagacgggtggtcaaaaagagagcagcaggtcagacggaggg
gacactcaggggaatggatgcagccgacgtctggaggagaccgataaagagtctgaggac
gaaggggaggatgaggacggcgagaggagagttgaaggggctgaggatgaggactcagaa
gactctgtgaccgggactaaggtgaaggtaaagtacggccgagggaagacccagaagata
tacgaggccaatatcaagaaaactgagaacgatgatgccggagatgtcctctacctggta
cactactacggctggaacgtcaggtatgatgagtgggtcaaagcagatcggatcatctgg
cctgtcgacaagggtggaacaaaaaataaacagaaaaagaaagtcatgaacaaagaggat
ggagagaaggacaagcaggggaagctgggtgggttgagaggtcgccctcttctcagaacc
actccccccagtgccaaccgcagcgtctccaagacccccagccgtgaggggcgctccagc
agcaagagcaaatctgacacatcacccctgcccaatggagagggtacccctcgccgacgc
acaagaagaacctctgggatgtatgactcagacagggatgccaactccaatgatgagtcg
gggaattcgtccgaggacagtgagtcagaggattcgccggagaagaagcctgcatgggcg
gagagaacggaccccgccacagcccgtaaacaggaagaggaggaggacctgagggtggag
agaggaagagcagtggccgccgcagcagcccaggcagcagcagcagctgcacagctccaa
ccccccagcagccctaaggagaaggagcagcagcaggaagacaaactccctgagagggag
cctgagaaagaggaggctgaggagcagctccagacgcctcccatgacccctgaacccgac
agacccaaggaggaagacacccctaacctgaaatcccccaggcctaaagcatcacgtaga
agtaacgttagagagcccgagaggaacaccaacatcactggctctgagatacccaccact
cccaaccacactgagacggagtcgttccccagcccatgccccctaaagaggcaggatgag
cccatggtggttcttcactgtctctctgctgagcacctccccagcatgcctgacctcccc
atcatggactccgacacagactccgccccggaggaggagatctgcagggaggagcgaggc
gtggccaagcgtaaagccaccgaccacaggacgccggacaagaaggtgcgtctagactgg
agggaggatactgccagaatggcatcgccgggcgcgaggccccatgactcgccgggcgcg
aggccccatgactcgccgggcgcgaggccccatgactcgccgggcgcgaggccccatgac
tcgccgggcgcgaggcccacgactccagagcggaggctggagtcggggggactgaaagaa
gaggagtgtctgaagccagcgaagggtaaaacagaaccggaggttaaaacagagatgcct
gccctcactccggaggtgcggtgtcgaggtctaggagagggaggtgttgcaggaggtcag
cccaggtcagagcagccagactatggggcagaggaggagctgatgccccagatagggcct
gaggcgctggtctgccacgaggtggatttggacgacctggatgagaaggacaagacctca
gcagaagacctcctaatgatgatgagccaagggaaggtccatgctccccctccatccaat
gcctcctcccaccacccccagacccacaacaaccctcctccatcctccggtggagctgct
cctccacaagtcttttcccccacctcggcccctagccctgatgagtctataagcaccaag
agtgagagcgacgtcaccatcgaggttgacagcgtagctggggagtctcaggaggggctc
ggtgataatgagtcggccaactccaactgctttgaagccaacaccagctctagcaactcc
agcatgtcactacaggagagagacaccaaggacagaggtcagaaaaggttgatggactgc
aatatgagttgttctgcaaagaagcagaagcgcaaccagaaacggccaagcactacgtcc
aaaatggagaagaatggagcagagtacagcagtgacagtgaggacctggctgttatggac
ccctcctgtaagatgactccagtgaaacactcaatgtctaaaggaagcctgaagttggtc
tctcctaacagtaaggagttagagaaggacaagcacaaacacaagcagtcctccttcccc
tcccctcgcacatacaagtggaccttccagctcaatgaactggacagcatgacaagtgct
gagaggatttccttcttacaagacaaactacaggatataaggaagtattacatgtcactc
aagtctgaagtggcctccatagacaggaggcggaagaggttaaagaagaaagaaagagaa
gtgtcccacaccacagcttcaacatcgtctggctcgtcagacactgggatgagcccctcc
tccgcctcaccgactcagaacactgtggctgtcgagtgcaggtga
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