Oncorhynchus nerka (sockeye salmon): 115138712
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Entry
115138712 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115138712
03012 Translation factors [BR:
one03012
]
115138712
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115138712
mRNA cycle factors
Stress granule specific factors
115138712
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115138712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
115138712
NCBI-ProteinID:
XP_029531708
LinkDB
All DBs
Position
LG2:complement(35245461..35326547)
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AA seq
1811 aa
AA seq
DB search
MSLPTKIVPKPATVAVSGPGAVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQQPSGSQTPEQGQG
QAHPAYSLEPPKQQQPTPGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWREASA
PVTAPSPPVEKELPSPAPVMVAPIPAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLPPT
THSQTPNTVEPLPEAPHTLAASPTLTPKALNGHADTGAELDTQAQEPSPLDPSPSPPQPQ
ASTPAFREDCSEAVPSEVRAEIPPAVTDSIAPITVVPVTLTSKPAPAFPAPPPGLPPLVQ
ATAEASKPADTKDVPLKVGTEAFITPDNKPEPQLQALSRKSPSTGCQAAPDAPKTWKKPN
EESPVGDAQQRETEEELKPLEEAAGDQALPPARSCSTSPPPSAAPSALEAEEMPPAPEEN
GEAEPMRNGAGHTSETESSDSGATPGDNEGSTGAPPDLFQEDLETNGKRQYKRDFLLGFQ
FMAACTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRG
GAAVSHTHSQAHQMMNMGGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDD
PEVITTQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGF
SVAYGNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSA
QSSDQERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESL
ECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVS
RRADQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRV
QQRDETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSE
LSRSGGGGASLNRYSALQSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPAPS
RPGSFVRGGSAKELLESPALSPEEPRRELESPSVSEDKTERSSAREPVKAEPVVAQSPDR
PALSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLERSQITR
DHMGKLLFQLVQQDILARSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDRGFS
MRELFSELSKPLLPVGRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPEGEDVQ
DFISEQKLQFTEADCSSHEAALATTALSLVVLNQQLERLLLEDMASDEQIFDWVEANLDE
SQMSSSPFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQALYAL
QALIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTAFFTW
LREAEEESEDN
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtcccaaaacccgccactgtcgcagtaagtggacctgga
gctgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcatcctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggagggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacagccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacacttcatctctgcggcccggctctcagaaccccacagca
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgccggggtctggcaccttctatcctggccctgggccg
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
cccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcacattttc
tacctcaaatcgcagcagcagcagccgagcggcagccagactccggagcagggccaaggc
caggcccacccagcctacagcctggagccccccaagcagcagcagcccacgcctggggct
gcagacagcaaaccagggccagtatatgataagccaaaattggagccggttatccggaag
ccttcctctcccgggattggacaaccagaaccttctatggcgtggcgagaggccagtgca
cctgtaactgccccatctccccctgtagaaaaagagcttccctctcctgccccagtgatg
gtggcacccatccctgcccctcgtcctgttgccagccccaaccccattgagcagccctct
gcagtggagcctgctactcccactccctctgcagctgagcccaagaccctgcctcccacg
actcattcccagaccccaaacacagtggagcctcttccagaagccccacacaccctggct
gcttcccccaccctaaccccaaaagctttgaatggccatgctgacactggggctgagctg
gacacccaggcccaggagccctccccccttgatccctctccctccccaccccagccccag
gcttcaaccccggccttcagagaagactgtagtgaggctgtgcccagtgaggtgagagca
gagatcccccctgctgtcacggactctatcgcacccatcactgtagtgccagtcactctg
acctccaaacctgcgcctgcttttccagcacctccccctggccttccaccactagtgcag
gccacagcggaggccagcaagcccgccgacactaaagacgtccctctcaaagtagggaca
gaggcattcataacaccagacaacaagcctgaaccacagctacaagccctctccagaaag
agtccctctacaggatgtcaggctgctcctgatgcaccaaagacctggaagaaaccaaat
gaagagagtcctgttggagatgcccaacagagggagactgaggaggagctcaagcctttg
gaagaggctgctggagaccaggccctgccacccgccaggagctgcagcacctcaccccca
ccctcagcagctccctcagccctggaggcagaggagatgcccccagcccctgaggaaaac
ggggaggctgagcccatgaggaacggagcaggacacacctcggagactgagagcagtgac
agcggggctacccctggggacaatgagggctccacaggagcacccccagacctcttccag
gaagatctggagactaatgggaagcgtcaatacaaacgggacttcctgctgggctttcag
ttcatggctgcctgtacacagaagccagacgggctgcctcagatcagtgacgttgtgctg
gacaagataaaccaaaacaagctgccaacccgggcggtagaatccagggtgatctcccga
ggccctgacttcacaccggcctttgctgactttggcagacagatgagtggaggacgcggc
ggagctgcagtgagtcacactcactcccaggctcatcagatgatgaacatgggggggggt
gcccggcggcccccgcccaggaagattatcctgaacgtgtcagcgaatgaagaggtgcaa
ctgaagaaggctgagaatgcctggaaacccggcatgaagagggcggggccatcagatgac
cctgaggtcattacaacacaggagctcttccggaaggtgcgcagtatcctcaacaaactg
acgcctcagatgttcaaccagctgatgaagcaggtgacagacctcaccatcgacacggag
gagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgagcccggcttc
tctgtggcctacgggaacatgtgccgctgcctcaccacgctcaaagtgcccatgacggac
aaacccggaaccacagtgaacttccgcaaactgctgctcaaccgttgtcagaaggagttt
gagcgggacaaggtggatgatgtggtgtttgaaaggaaacagaaggaacttgactctgca
cagtccagtgatcaagagagactacggttagagctggaggaggccaaggacaaggcccgc
cggcgctccatagggaacatcaagttcatcggggagctgttcaagctcaagatgctgaca
gaggccatcatgcacgactgcgtggtcaagctgctgaagaaccatgacgaggaatcgctg
gagtgcctttgcaggctgctcaccaccatcggcaaggacctggactttgagaaggccaag
cctcgcatggatcagtatttcaaccagatggagaaaattgttaaggagcggaagacatcg
tctcggatacggtttatgctgcaggacgtgatagacctccgattgcacaactgggtgtcc
aggagagctgaccagggccctaagaccattgagcagatccacaaagaggccaagattgag
gagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacaccaagagaagg
ccagagcaacaacagcagcagagagaacagcaaagggagcagcagagggagcagcgtgtg
caacagagagacgagacctggaacactgtgcccatgaccaagaacagcaggacaatcgac
cccaccaagatccccaagatctccaagcctcagatggatgagaagatccaactaggacca
cgagcctcactcaactggatgaagggcagcagcggaggggccaaggccagtgactccgaa
ttatcccggtctggtggtggtggtgccagtttaaaccggtactctgcactccagtccact
caatctcatcaaaccaccccaccggcacagaacctagagtatgacactagaagaaccttg
ggcagtcgaagcagtgcagggagagagcgaagtgagaagcccctgagcccagctccgtcg
aggcccggttccttcgtccgaggcgggagtgccaaggagcttctggagagcccggccctg
agccctgaggagccccgcagagagctggagagccccagcgtaagcgaggacaagactgag
cgaagcagtgccagggagcctgtgaaagcagagcctgtggtggcccagtctccagacaga
cctgccctctctgaggaggagatggagaggaagtccagagctatcattgacgagttcttg
cacatcaacgattataaggaggctgtgcagtgtgtggatgagctggacatgtcctctcag
ctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgcagtcagatcacacgg
gaccacatgggcaagctcctcttccagttggtgcagcaggacatcctggccaggtcccaa
ttcttcaaagggtttgctgacacccttgagctggcggatgacatggccattgacattccc
catatctggctgtatctggccgagctgctcagccctgtgctgagagacaggggcttctct
atgagagagctctttagtgaattaagcaaacctttacttcctgtgggaagagctgggatc
ttattttctgaaatactgcacatactatgcaaacaaatgagccataggaaagtgggcacc
ttgtggagagagtcgggcctcagctggagtgacttcttgccagagggagaggatgtccag
gatttcatctcagagcagaagctccagttcactgaggcagactgctccagccatgaggca
gccctcgccacgacagcactgtcccttgtggtgctcaaccagcagctagagagactgctg
ctggaggacatggccagtgatgagcagatctttgactgggtagaggcaaatctagatgaa
tctcagatgagctcctctccgttcctgagagctctgatgacggctgtgtgtaaggcagcg
gtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcattcagaggagattgccc
gtattactcaagtaccttaactcagacactgagcgacagcttcaagcactttatgcactg
caggcgctgatagtcactttggatcagcctcctaacctgctccggatgttcttcgattgt
ctgtatgatgaggacgtcatctcggaggacgctttttacaagtgggagaccagcaaagac
ccagcagaggagctgggcaagggtgtggctctcaagtctgtaacggctttcttcacttgg
ctgagggaagccgaggaggagtctgaggataattga
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integrated database retrieval system
