Oncorhynchus nerka (sockeye salmon): 115138732
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Entry
115138732 CDS
T07952
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K27409
spectrin beta, erythrocytic
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115138732
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115138732
Intermediate filaments
Intermediate filament-binding proteins
115138732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
DYH2-5-8_CC
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
115138732
NCBI-ProteinID:
XP_029531744
LinkDB
All DBs
Position
LG12:complement(52430056..52498366)
Genome browser
AA seq
2153 aa
AA seq
DB search
MTSTTDFDNVEITQQYSRINTRFELLGEELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILSRVSCRISDLYLDLRDGRMLIKLLELLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQADGTQRESRTAK
DALLLWCQMKTAGYPNVNITNFTTSWKDGMAFSALIHKHRPDLVDYSGLKRSNPTHNLQN
AFNVAEQTLGVAKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDH
AIETEKMIDKYETLSSDLLPWIQQTIIILNNRKLANSLTGVQQQLQSFNSYRIVEKPPKF
QEKGNLEVLLFTIQSRMRANNQRVYTPKEGALVADLNRAWEHLEWAEHERERVLRDELIR
QEKLEQMARRFDRKASMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHEAIETDIAAYEE
RIQGIVAISKELESERYHDTKRIDVRKDNILRLWDYLQELLKARRARLDKNLTLQRIFQE
MLYIINWMDGMKARLLSPDFGKHLLEVDDLLQKHALVEADITVQAERVHDSNAAALKFAN
RDSYKPCDPQVIKDRVQHLDLCYQELCALAAQRRARLEQSRRLWNFFWEMAELESWIKEK
EHIFSSLDYGKDLTSVLVLQSKHSAFENELGARRAHLQQILDEGDKMIQARHFGAPQVGD
CMEDVMRQWQQLEELAAFRRQNLQDTQRFFQFQGEAEDLKAWLLDAKRQMTSDDMGHDEY
TTQRLLKRHRDLRNDVARNGATIDALTKQAAALPEELRNTPDIQRRLKDIRDLYMELMSL
CDLRQKKLGDTMALYTIFSETDSCELWMGQKETWLVGLDVPENLEDLEVVQNRLNILASD
MANVQTRVDDVNKAVKQLEDSRHPCTKEVKKCQLRLNKRWEAFKAMVVDKKRKVDSALSY
HNYGLECDETEAWIRDKTRVIKSTQDLGNDLNAVMTIQRKLYGMERDLAAIEDKLHFLRS
EADQLAKDHPDNAADILFRRAELDAAWDNLRATLKDREDSLGEVSKLQTFLQDMDDFQSW
LFKTQKAVASEDLPETLPQAEQLLNLHDDVYDEMDAHEEDYHKVRDMGVAVTQGQLDDPQ
YQELDKRLKGLDRGWDELHKMWDSRKGFLDQGLGFQLFMRDTKQVETILNNQEYTLAHTD
KHDTLDGAEQALKKHEDFVCTMDANMEKLASTLEGGQRLVDNGNLYSPRVQEKMDSIHDR
YNKNRGKANEVTGILKDNRDLQHFLQNTQDLTLWINEKMLTAQDVSYDGDRNLHTKWKKH
QAFMAELASNKDWLNKIDQEGQELMDSKPDLEPIVTVGLARLHELWDKLESTAEDKARLL
FDANRSELFDQSQADMKKWLAELQKELQGDDEVKDLTNANILLKKHQQTENHVRDRAREL
EDLQEAVQKHGGPAGSREDQPELEAEQQAIQRDFQQLLTPLAQRRGKLEAAKAVHQFYRD
LADEILWVEERLPLAMSDEHGSNLQTVQLLLKKNQTLQREMKGHQPRVEEVLERGRRMAS
AATEECGPEAERIGEQVKELKEVWARLQEEMAKRRERLNGSNRAQQYYNDADEAEAWIGE
QELYMIADDKAKDEQSAMLMSKRHLIVKQAVDVYSDSIQKLSDRAQKMLNEDHPNGESII
RRQGQVDKQYAGLKDLAEDRRRKLDHVYHHFLLSREVEDLEHWIAERDVVASSQEMGQDL
DHVTILRDKFRDFSRETGMVGQERVDYVNQTIDELIKAGHTEAAAMADWRDSVNESWADL
LELIDTRVQLLQASHDLLKYFDDGKELVSQIQEKLNEIPADLGEDFSKADTFHRMHAAFE
RDISALGKQVQQFQETAGRLHAQYAGDQATEIQAQEKEVVEAWKALLDACDGRRKRLEET
ADKFRFFTMVRDLMAWMESTIQQIETQEKPRDVSSVELLMKYHQGIRSEIDQRGPKFSDC
VAHGKALLACKHKYSAEIKEKLIQLMEKKKEMMTKWDDRWDWLRLLLEVCQFARDASVAE
AWLVAQEPYVASKDLGQTINEVEKLLKRHEAFEKSTATWEERFSALERLTTVCGRLGYGM
WDRILCVFVFVSVICVKLHPHLAVFSDVTIFHINKYSIQYGCVSIHYLFVGES
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccacggactttgacaacgttgagatcactcagcagtacagccgcatcaac
acacgcttcgagctgctaggagaggagctggacaatgacaacagctctgcaagactgttt
gagaggtcacgcatcaaagccctcgcagatgagcgtgaggcggtccagaagaagaccttc
actaagtgggtcaactccatcctgtcccgggtcagctgccgtatctctgacctgtacctg
gacctcagggatggacgcatgctcatcaaactactggagctcctctctggagagaaactg
cccaagcccactaagggccgtatgcggatccactgtctggagaacgtggacaaggccctg
cagttcctcaaggagcagagggtccacctggagaatatgggatcacacgacatcgtcgac
ggcaaccaccgcctcatcctgggactcatctggaccataattctcagattccagatccaa
gacatcgtggtggagatgggacaggcagacgggactcaacgggagagccgcacagccaag
gatgctctgctactctggtgccagatgaagactgccggatatccaaacgtaaacatcacc
aacttcaccaccagttggaaagacggaatggcgttcagcgctctcatacacaaacaccgg
ccagacctggtggactatagtggcctgaagaggtccaatccaacccataaccttcagaat
gccttcaatgtagcagagcagacgcttggagtagcaaaactgttagaccctgaagatgtg
ttcacagagaacccagatgagaagtccatcatcacatatgttgtggctttctaccactac
ttttccaagatgaaggcattagcggtggaggggaagagagttggcaaggtactagaccat
gccatagagacagagaagatgattgacaagtatgaaaccctgtcgtcagacctgctgcca
tggatacagcagaccatcatcatcctgaacaaccgtaaactggcaaactctctgaccggg
gtccaacagcagctccaatccttcaactcctaccgcatagtggagaaaccacccaagttc
caggagaaaggtaatctggaggtgctgctgttcaccatccagagtcgtatgagagccaac
aaccagagagtctatacccccaaggagggggctctagtggctgatctcaacagggcctgg
gagcatttggagtgggcggagcatgagagggaacgtgtcctgagagatgagctgattcgt
caggagaaactggagcagatggccagacgcttcgacaggaaggcttccatgagagagacc
tggctactggagaaccagagactggtggcacaggacaacttcggctacgacctgccggcg
gtagaggccgctaagaagaagcacgaagccatcgagacggacatcgctgcctacgaggaa
cgcatccagggcatagtagccatctctaaagagctggagtctgagcgttaccacgacacc
aagcgcatcgacgtacgtaaggacaacatcctgaggctgtgggattacctacaggagctg
ctgaaagctcgcagggcacgactggacaagaacctcaccctgcagaggatcttccaggag
atgttgtacatcatcaactggatggatgggatgaaggctcggctgctctcccctgacttt
gggaagcacctgttggaggtggatgacctgctccagaagcatgctctggtggaggccgac
atcactgtgcaggcagaaagagttcacgactccaacgcggctgctctcaagtttgccaat
agagatagctacaagccctgtgacccccaggtgattaaggaccgggtgcagcacctggac
ctgtgttaccaggagctgtgtgcccttgcggcccaacgccgcgctcgccttgagcagtcc
cgacgcctctggaacttcttctgggagatggccgagctggagagctggatcaaggagaaa
gagcatatcttctcctcgctggactacggcaaggacctgaccagtgtgctggtcctgcag
agcaaacacagtgccttcgagaacgagctgggggctcgccgtgcacatctgcagcagata
ctggatgagggtgataagatgatccaggccagacacttcggggcaccccaggttggggat
tgcatggaggacgtgatgcgtcagtggcagcagctggaggaactggcagcgttcagaagg
cagaacctccaggacacccagaggttctttcagttccagggagaggctgaagacctgaag
gcctggctgctggatgccaagaggcagatgactagtgatgacatgggccatgatgagtat
accacccagaggctgctgaagagacaccgagacctccgtaacgatgtcgccaggaacgga
gccaccatcgatgctctgaccaaacaggcggcggcgctacccgaggagctgcgcaacacg
cctgacattcaaagacgcctgaaggacatcagagacctgtacatggagctaatgtccctg
tgtgacctgaggcagaagaagctgggtgataccatggccctctacacaatcttcagtgag
acagactcctgcgagctgtggatgggccagaaggagacctggttggtggggctggacgta
ccggagaatctagaggatctggaggtggtgcagaacaggttgaatattcttgcttcagat
atggctaatgtccagacgcgtgttgatgatgtcaacaaagcagtgaagcagcttgaggac
agcagacacccttgtaccaaagaggtgaagaaatgccagttgagacttaataagaggtgg
gaggccttcaaggccatggttgtggacaagaagcgtaaggtggattcagctctcagctac
cacaactatggactggagtgtgacgagacagaggcctggatcagggacaaaacccgggtc
atcaagtctacccaggacctgggcaacgacctgaacgctgtgatgaccatccagaggaaa
ctctacggcatggagcgggacctggctgccatcgaagacaagctccacttcctgaggagc
gaggcggaccagctggccaaggatcacccagacaacgctgcagacatcctgtttaggaga
gccgagctggacgcagcctgggataacctgagggccaccctgaaggaccgggaggactct
cttggagaggtgtccaaactgcagacctttctacaggacatggatgacttccagtcctgg
ctcttcaagacccagaaggccgtggcatccgaggacttgcctgagaccctgccccaggct
gagcagctgctgaacctccacgatgatgtatatgatgaaatggatgctcatgaggaggac
taccacaaggtgagggacatgggcgtggcggtaacccagggccagctggacgaccctcag
taccaggagctggacaagaggctgaagggtctggaccgcggctgggacgagctccacaag
atgtgggacagcaggaagggcttcctggaccagggcctgggattccagctgttcatgagg
gacaccaagcaggtggaaaccatcctcaacaaccaggagtacactttggcccacacagac
aagcacgacaccctggatggagccgagcaggccctaaagaagcacgaggactttgtctgc
accatggacgccaacatggagaagcttgccagcacgcttgaggggggacagagattggtg
gacaatgggaacctctactcccccagggtccaagagaagatggactccatccatgacagg
tacaacaagaaccgaggcaaagccaacgaggtgacagggatcctcaaggataaccgtgat
cttcaacacttcctgcaaaacactcaggatctgactctgtggataaacgagaagatgttg
actgctcaggacgtgtcgtacgacggagacaggaaccttcacaccaagtggaagaagcat
caggccttcatggctgagctggcctccaacaaagactggctcaacaagatagaccaggag
ggtcaggagctgatggactccaaacctgatttagagccaatcgtaacggtgggtctggcc
aggctgcatgagctgtgggacaagctggagtccactgccgaggacaaggcccgtctgctg
tttgatgctaaccgctccgagctgtttgaccagagtcaggcagacatgaagaagtggctg
gctgagctgcagaaggaactacagggagacgacgaggtcaaggacctcaccaacgccaac
atcctgctcaagaagcaccagcaaacagagaaccatgtgcgtgaccgagccagggagctg
gaggatctccaggaggctgtccagaagcatggtggcccggccgggagcagggaggaccag
ccggagctggaggctgagcagcaggccatccagagggacttccagcagctcctcaccccc
ctggcccagcgcaggggcaagttggaggcagccaaggccgtgcatcagttctaccgggac
ctggctgatgagattctctgggtagaggagaggttgccccttgcgatgtcagatgaacat
ggcagtaacctccagacggtccaattgctgttgaagaagaaccagacgttacagagggag
atgaagggccaccagccgcgggtggaggaggtgttggagcgtggccggaggatggcatca
gccgctacagaggagtgcgggccggaggcagagcgtattggagagcaggtgaaggagctg
aaggaggtgtgggccaggctacaggaggagatggctaagaggagagaacggctgaatgga
tctaaccgggcccagcagtactacaacgatgctgacgaggcagaagcctggataggagag
caggaactctacatgattgctgatgacaaggccaaggatgagcagagtgccatgttgatg
tcgaagcgtcacctgatagtgaagcaggctgtagatgtctactcagactccatccagaag
ctgtctgaccgtgctcagaagatgctgaatgaagaccaccctaatggtgaatctatcatc
cgtcgtcagggccaggtggataaacagtacgctggtctgaaggacttggcagaagaccgc
aggaggaagctggaccatgtctatcatcacttcctgctgagccgagaggtggaggatctg
gaacactggatcgctgagagggacgtggtggcctcctcacaggagatgggacaggacctg
gaccatgttacaatcctgagggacaagttccgtgacttttcccgggagacagggatggtg
ggacaggagcgggtggactatgtgaaccagacgatagatgagctgatcaaggcgggccac
acggaggctgctgccatggctgattggagggacagcgtcaacgagagctgggctgacctg
ctggaactcatagacacccgagttcagctcctacaggcctcccacgacctgctcaagtac
ttcgatgatgggaaggagctggtgtctcaaatccaggagaaactaaatgagattcctgct
gacctgggagaagacttcagcaaggcagataccttccaccgcatgcacgccgccttcgag
agggacatcagcgctctgggaaaacaggtgcagcagttccaggagacagcgggccgtctg
cacgcccagtatgctggggaccaggctacagagatccaggcccaggagaaggaggtggtg
gaggcctggaaggctctactggatgcctgtgacggccgcaggaaacgcctggaggagaca
gctgacaagttccgcttcttcaccatggtccgagacctgatggcctggatggagagcacc
atacagcaaatagagacacaggagaaaccacgggatgtgtcatcagtagagcttcttatg
aagtaccaccaggggatcaggtctgagatcgaccagcgtggaccaaagttctctgactgt
gtggcgcacggcaaggctctgctggcatgcaaacacaaatactctgctgagatcaaggag
aaactgatccagctgatggagaagaagaaggagatgatgaccaagtgggacgaccgatgg
gactggctcaggctcttgttggaggtgtgccagtttgcgcgggatgcctcagtggcggag
gcgtggctagtggctcaggagccgtacgtggccagtaaggacctgggacagactataaac
gaggtggagaaactactgaagagacacgaagccttcgagaagtccactgccacctgggag
gaacgcttctcagccctggagagacttactacggtatgtggtagattgggttacggtatg
tgggataggattttgtgtgtgtttgtttttgtgtctgtgatctgtgtaaagcttcatcct
catttggcagttttttctgatgtcaccattttccatataaacaagtacagtatacagtat
gggtgtgtgtctatccattacctgtttgtgggcgaaagttag
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