Oncorhynchus nerka (sockeye salmon): 115138827
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Entry
115138827 CDS
T07952
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115138827
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115138827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS_9
PAS
Motif
Other DBs
NCBI-GeneID:
115138827
NCBI-ProteinID:
XP_029531881
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Position
LG12:49181171..49209053
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AA seq
717 aa
AA seq
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MCVCVFASTVESTSPTLLPPDNILERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIR
MAMTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVHMDLNIVYCENRISDYMD
LTPVDIVGKRCYQFIHAEDVEGIRHIHLDLINKGQCVTKYYRWIQKNGGYIWIQSSATIA
INAKNGNEKNIIWVNYVLSNPEYKDTPMDITQLPNLPEKASESSETSDSESESKDNSDDN
ENSKWDRKGNQTENTEDPETDSTKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDLEPS
DCEVETKEGRLGRLEDLHIKVEHYGDGNGGVELHDSPSSSSEEEDDDDDEEDDDSFKACD
SAIKTLATPAASKQQKRKKRRKKQKWDGSRPKRMCLSSATPSSNTFVGAVPLLPTPSPAS
ASVLKIKTEMSEPINFDNDSIIWNYPPNREISRNESPYSMTKPVPAHDTFPSPQPGSLQV
SIPDSVLTPPGTEGGSGGAGTRKGVPPSFSGYSSAPSSASSTASLAPPSGSGSSSDPLSP
PLSASPRDNQQCQSTPTTSGSSLLYTSDLEALQRLQAGNVALPLVQRVTGTLATTSTAAS
RVYTTGTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPSFGIDPKTPMEMLYHHV
HRLNMAGPFGGTMSGASLTQMPAANVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgtgcgtgtttgcctccacagtcgagtcgaccagccccaccctgcttccccca
gacaacattctagaacgctccttcttcgtccgtatgaagtccacactgaccaagagaggt
gtccacatcaagtcttcaggctataaggtgatccatgttacaggcaggctgaggatccgt
atggcaatgacccacagtcggtcagtacccattcagatcatgggcatggtggtggtagcc
cacgccctccccccccccaccatcaacgaggtgcgcatagactgccagatgtttgtcacc
agggtccacatggacctcaacattgtctactgtgagaatagaattagcgactacatggac
ctgacgccagtggacatcgtagggaagaggtgctaccagtttattcacgcagaggatgtg
gagggcatccggcacatccatttagacttgataaacaagggccagtgtgtgaccaagtac
taccgctggatccagaagaacggtgggtacatctggatccagtccagtgccaccatcgcc
atcaatgccaagaatggcaatgaaaagaacataatctgggtcaactacgtactcagtaat
ccagagtacaaggacacgcccatggacatcacccagctacccaacctcccagagaaagcc
tcagagtcttcagagacatccgactctgagtccgagtccaaggacaactctgacgacaac
gagaactccaagtgggacaggaaggggaaccagactgagaacacagaggacccggaaaca
gacagtacaaagcagcagcagggccagtcgtcctcagagcaggagatgaggcgtcaggag
gagggagacagctcctccaacccagagagccaggagagcgaggacgatctggagcccagc
gactgtgaggtggagaccaaggagggcagactgggccggctggaggacctgcacatcaag
gtggagcactacggagatggaaacggaggggtggagctgcacgactcgccttcctcctcc
tctgaagaagaagatgatgatgacgatgaggaagatgacgacagctttaaagcctgtgac
agcgccatcaagactctcgccacccccgctgccagtaagcagcagaagcgtaagaagagg
aggaaaaagcagaaatgggacggtagtcgtcctaaacgtatgtgcctctcctctgccacc
cccagctctaacacctttgttggggctgtccccctcctgccgaccccctcccctgccagt
gcctctgtgctcaagatcaaaacggaaatgtccgagcccatcaacttcgacaatgacagc
atcatctggaactacccacccaacagagagatctccaggaacgagtctccctacagcatg
acgaagcccgtcccagcccacgataccttcccctccccacagcctggtagtctgcaggtc
tccatcccagactcagtgcttactcccccaggaacagaggggggcagtgggggcgcaggt
accaggaagggcgtacccccctccttcagtggttatagcagcgccccctcctcggcctcc
agcaccgctagcctggcccctccctctggctctgggtcctcctccgaccccctgtccccg
cccctctcggcctcgccgcgcgacaaccagcaatgtcagagcacccccaccacgtccggc
tcctccctgctgtacaccagcgacctggaggccctgcagaggctgcaggccgggaacgtg
gcgcttccactggtccaacgggtcaccggcaccctcgccacgaccagcactgctgcctca
cgggtctacaccactggcaccatccgctacgcccccgccgacgtcactctggccatgcag
gcaggcgccaacctgctgcccaacaatgtggcccacgctatgaactttgtggatgtcaac
ggtagccccagcttcggcatcgaccccaagacacccatggagatgctgtatcatcatgtc
caccggctcaacatggctggcccttttgggggtaccatgtccggcgccagtctcacccag
atgccagcagccaatgtattcaccacggcagagggactgttctctactcttccattccct
gtctacagtaacgggatacacaccacacaaactctggagcgcaaagaagattag
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