Oncorhynchus nerka (sockeye salmon): 115138850
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Entry
115138850 CDS
T07952
Name
(RefSeq) calpain-3-like
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115138850
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115138850
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
115138850
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C2: calpain family
115138850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
CAPN13-like_C_EFh
EF-hand_8
EF-hand_1
EF-hand_7
nos_propeller_2
Motif
Other DBs
NCBI-GeneID:
115138850
NCBI-ProteinID:
XP_029531902
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Position
LG12:54534319..54569477
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AA seq
839 aa
AA seq
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MEQQDTSPCSIPLNRLVVPAPCSIPLNHLVVPAPCSIPLNHLVVPAPCSNPLNHLVVLAP
CSNPLNRLVVPAPCSIPLNHLVVPSPCSNPLNRLVVPAPCSNPLSRLVVPAPCSNPLNHL
VVPAPCSIPLNRLVVPAPCSIPLNHLVLPALCSNPLNHLVVQAPCSIPLNHLVVASPCSN
PLNHLVVPAPCSIPLNHLVVASPCSNPLNRLVVPAPCSIPLNHLVVASPCSNPLNHLVVA
SLWSNPLNHLLYQLSGDCWLLAAIACLTLNEKLLYRVVPQDQSYSEGYGGIFHFQFWRYG
DWVDVVIDDRIPTFNNQLVFTKSAERNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDF
TGGVTEFYEMKEAPKELYKIMKKALERGSMMGCSIDSLVPARFETRTVTGLVKGHAYSVT
AVEESQHKASKVRLVRLRNPWGQVEWNGPWSDNSKEWVSLSKGEKDQLQHQSAEDGEFWM
SFEDFKKNYTKIEICNLTPDALEDDKIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQ
FRLCLLEEDDDSEDNEVACSFVVSLMQKNRRKERKLGANLFTIGFAIYEVPKEMHGNKQH
MQKDFFLFNSSKARCKSYINLREVTQRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRN
TSEEIENRIEADHTVPAPANAGEESEDDQHFRSLFQQIAADEMEVTANELKNVLNRVVSK
HKDLNTEGFSLECCRSMIALVDMDGTGRLSLQEFRHLWNKVKQWQGIFRHYSSDQAGIIN
SYEMRNAINDAGFRLNNQLYDIITMRYANEGMNIDFDSFISCLVRLEAMFSKSHARSSP
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggacacctcaccgtgttccatcccactcaaccgcctggtggttccagca
ccgtgctccatcccactcaaccatctggtggttccagcaccgtgttccatcccactcaac
catctggtggttccagcaccgtgctccaacccactcaaccatctggtggttctagcaccg
tgctccaacccactcaaccgcctggtggtgccagcaccgtgctccatcccactcaaccat
ctggtggtgccctcaccgtgctccaacccactcaaccgcctggtggtgccagcaccgtgc
tccaacccactcagccgcctggtggtgccagcaccgtgctccaacccactcaaccacctg
gtggtgccagcaccgtgttccatcccactcaaccgcctggtggtgccagcaccgtgttcc
atcccacttaaccacctggtgctgccagcactgtgctccaacccactcaaccacctggtg
gtgcaagcaccgtgttccatcccactcaaccacctggtggtggcatcaccgtgctccaac
ccactcaaccacctggtggtgccagcaccgtgttccatcccactcaaccacctggtggtg
gcatcaccgtgctccaacccactcaaccgcctggtggtgccagcaccgtgttccatccca
ctcaaccacctggtggtggcatcaccgtgctccaacccactcaaccacctggtggtggca
tcactgtggtccaaccccctcaaccatctgctctaccaactgtctggtgactgctggctg
ctggctgctatagcctgtctgactctgaatgagaagcttctctaccgggtcgttcctcag
gatcagagctactccgagggatatggaggaatcttccacttccagttctggcgctatggc
gactgggttgacgttgtcattgacgaccgcatccccaccttcaacaaccagctggtgttc
accaagtctgctgagaggaacgagttctggagcgccctgctggagaaggcctacgccaag
cttcacggttcctacgaggccctgaagggcggtaacaccacggaggccatggaagacttc
accgggggcgtgacagagttctatgagatgaaggaggcgcccaaggagctgtacaagatc
atgaagaaggccctggagagaggctctatgatgggctgctctatcgactccctggttcct
gctcgatttgagacgcgcactgtgaccggccttgtgaagggccacgcctactctgtgact
gccgttgaggagtcccagcacaaagcgtctaaggtgcgtctggtgcgcctcaggaacccc
tggggtcaggtggagtggaacgggccctggagtgacaactctaaggagtgggtgtctctg
tctaagggagagaaggaccagctccagcatcagagtgctgaggacggggagttctggatg
tcctttgaggacttcaagaagaactacaccaagattgagatctgcaacctgacccctgat
gccctggaggacgataagatccacaagtggacggtgtctgtgaacgagggtcgttgggtc
agaggttgctctgccggtggctgcaggaactacccagatacattctggaccaaccctcag
ttccgcctgtgtctcttggaggaggatgatgactcagaggacaacgaggtggcgtgttcc
ttcgtggtctctctgatgcagaagaacagacggaaagagaggaagttgggagccaatctc
ttcaccatcggatttgccatctacgaggtgccgaaggagatgcacggaaacaagcagcac
atgcagaaggacttcttcctgttcaactcatccaaggctcgctgcaagtcctacatcaac
ctgagggaggtgacccagcgcttccgtctgagccccggggagtacgtgatcatcccgtct
acctacgagcctcaccaggagggagagttcatcctcagagtcttctccgaaaagaggaac
acctcagaggagatagagaacaggatcgaggcggatcacacagtgccggccccagccaat
gcgggggaggagagtgaggatgaccagcatttccggagcctctttcagcagatagccgcg
gatgaaatggaagttaccgccaacgagctgaagaatgtcctcaacagggttgtctccaaa
cataaggacctgaacacagagggttttagcctggagtgctgcaggagcatgattgcactc
gtggacatggacgggacgggcagactcagcctgcaggagttcagacatctctggaacaag
gtcaaacagtggcaggggatctttagacactacagctcggaccaggctggtatcatcaac
agctacgagatgagaaatgccatcaacgatgcaggtttccgtctcaacaaccagctgtat
gacatcatcaccatgcgttacgccaatgagggtatgaacatcgactttgacagcttcatc
agctgtctggtccggctcgaagccatgttcagtaagtcacacgcacgctcttcaccttag
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