Oncorhynchus nerka (sockeye salmon): 115138995
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Entry
115138995 CDS
T07952
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115138995
Membrane trafficking [BR:
one04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115138995
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_EndoS
LRR_9
V-set
LRRNT
LRRCT
Big_2
LRR_Zer-1
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
115138995
NCBI-ProteinID:
XP_029532031
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Position
LG12:complement(42860334..42887210)
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AA seq
611 aa
AA seq
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MRRSALYHCHPLLGGALLLLLASCAMGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGTLKPYSFKRLPRLRHLEIDYWPWLEV
LPALSLHSLNLTTLSVTNTNLSSFPGHALRNLPYLTHLNLSFCHIQHIQQGVLDQLPRLQ
ELHLRGAQLVYIEPLAFLGLPALHMLDVSHNQLDSVERAVFKSPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPFLQLPDPQPECSAPERLRGKPLLDLKEPLVTRYVICTKPRIGPNTTQ
LLLADEGKPVRLNCIADGAPRPSMAWVTPHRQYVTVKSTGRVTVHTDGTLEIKAAELHDS
GVYLCVASNAAGNASLSASLAVKSLGISDTSLYANKIGLVEDSNGTWANGTVLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDMEYVPRKSNGTAAEATET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctccgccctgtaccactgccaccctcttctgggtggggctctgctgctactg
ctggctagctgtgccatgggctgccccgcccgctgcgattgctccgcccagaccaagtca
gtcagctgccatcgcaagcgcctgcccaccatccctgagggcatccccatcgagacccgg
cttctggacctgagcaagaacaagctgcggagcatcaccccagacaacttctcctccttc
ctacaactggaggatctggacctcagcgataacctgattggcgtggtcgaaccgggctcc
ttcaaatttcagctctccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cctgccggcgtgctctccggcctggccaacctcacaagtttggacctcagccacaacagg
ctggtggtgctgctggaccatggcttccaggaccttcggaggctgatgtccctggaggta
ggcgacaatgagctggtgttcatctcccagagggccttcacgggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgtggtgcccaccgacgccctgggtcacctg
cacagcctggtggagctccgcctgcgccacttgggcatcggcaccctgaagccctattcc
ttcaagagacttccccgtcttcgccacctggagatcgactactggccctggttggaagtc
ttacccgctctgtcactacacagcctcaacctcaccacgctctctgtcaccaataccaac
ttgtcttccttccccggccatgctctacgcaacctgccctacctcacgcacctcaacctg
tccttctgccacatccagcacatccagcaaggggtgctagaccagcttccgcgactgcag
gagttgcacctgcgaggagcccaactggtttacattgaacccctggccttcctgggcctc
ccagcactacatatgttggacgtgtcccacaaccagctggactcagtggaacgagctgtg
ttcaagtcccctgacagcctgcagacgctgctcatgggggggaacccactggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccaccctttctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcctccgtgggaaacccctgctggacctcaaggag
ccactggtgacacggtacgtgatctgcaccaagcccaggattgggcccaacaccacccag
ctgctgctggcagatgaggggaagcctgttcggctcaactgcattgcagacggggctcct
cggccctccatggcctgggtgacgccacatagacagtatgtcacagtgaaaagcaccggt
agagtgacggtccataccgacggcaccctggagatcaaggctgcagagctgcacgatagt
ggtgtgtacctgtgtgtggccagcaatgcggcgggcaacgccagcctgtcggcctcgctg
gcggtgaagagcctgggcattagcgacacatcgctctacgccaacaagattggactcgtg
gaagactccaacgggacctgggccaacgggaccgtcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagcaatgggctgcctgtccttcctgggtgtggtc
attttctgtttcctgctcctgtttgcatggagtcgtgggaagggaaggcacaagagcaac
tttgacatggagtacgttccccgcaaatcgaacgggacagcagctgaggcaactgagaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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