Oncorhynchus nerka (sockeye salmon): 115139001
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Entry
115139001 CDS
T07952
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115139001
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115139001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115139001
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Transforming growth factors (RSTK binding)
115139001
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Vir1p
Motif
Other DBs
NCBI-GeneID:
115139001
NCBI-ProteinID:
XP_029532037
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All DBs
Position
LG12:43593478..43598748
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AA seq
443 aa
AA seq
DB search
MDPIRAAAPLLWFSLCFGNILEAAVLGSLQYPSSADDNGLVSHLDEQSRRKPIAVSRKDP
PINDTIVPHDYMVSLYRTLSEIERRGLNSSVPRSARHANTVTSFVDQGKDPSSWGSGQRY
LFDLSSLSRTDEIVEAELRILRKPPLDRLPMLTWGRNLYRLLLYTCSSKGNSGRRLLDSR
TVDVLDREPPKWDVFDVWASVKARRRSHRTATGNDLLVACFDLLVVSELTKEAANPLTVG
LGRRSRQPQERALLVAFSRTRRKENLFKEIREQMKAVRRDLGFLDPSDLSGDVIGHLPRR
RQRRTALTGQSIGGAGGGGGGGGGGGGGGRGGGGGGRRKTRCSRRSLHVNFKELGWDDWI
IAPLDYEAHHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPDSSPPSCCVPSKLSPISILY
IDSGNNVVYKQYEDMVVESCGCR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatcctattagggctgctgctcctttgctatggttttccctgtgctttgggaatatt
ctggaggcagcggtacttggatcattgcagtacccctctagcgcagatgataacgggctt
gtttcacatctggatgagcagagtcggagaaagccgatcgcggtgtccaggaaagacccc
ccgataaatgatactatcgtcccccatgactatatggtatcgctatacaggacactctct
gaaatagagagacgaggtcttaacagcagtgttcctcgctccgcaagacatgccaacacg
gtgaccagtttcgtggatcaaggaaaagatccctcctcctggggaagtggccagcgctat
ctcttcgacctctccagcctgtccaggacagatgagatcgtggaggcagaactgaggatc
ctgagaaagccaccgctggatcgcctccctatgctgacgtggggcaggaacctttatcgc
ctcctcctctacacatgttcctctaaggggaactctgggagacggctgctggactccagg
acagtcgacgttctggaccgcgagcctcccaaatgggatgtatttgatgtgtgggccagc
gtgaaggctcggcggaggagccacaggacagcaacgggcaatgacctcctcgtggcctgc
tttgacctgctggttgtttcggagttgaccaaagaggcagccaaccctcttacagtaggg
ctgggacgccggtctcggcagccccaggagagggccttgctggtggctttttctcgcacc
cgcaggaaagagaacctgttcaaggagatcagggagcagatgaaggcagtgcgaagagac
ttgggttttctggacccttcggacctctctggtgatgtgattggtcacctacccaggcga
cgccaacgccggactgccctcaccggccaatctataggcggagctggtgggggaggaggg
ggaggtggtggtggaggaggaggaggaagggggggtggaggcggggggcgcaggaagact
cgctgcagccgtaggtcgctccatgtcaacttcaaggagttgggctgggacgactggatc
atcgcaccgctggattacgaggcgcaccactgtgagggcgtgtgtgactttccgctgcgc
tcacacctggagccaacgaatcacgccatcattcagacacttatgaactctatggaccct
gactccagcccgcccagctgctgtgtcccctccaaactcagccccatcagcatcctctac
attgactctggcaacaatgtggtctacaagcagtatgaggacatggtggtggagagctgt
ggctgcaggtag
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