Oncorhynchus nerka (sockeye salmon): 115139055
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Entry
115139055 CDS
T07952
Name
(RefSeq) ras and Rab interactor 2-like
KO
K17638
Ras and Rab interactor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115139055
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115139055
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
115139055
NCBI-ProteinID:
XP_029532090
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Position
LG12:3095155..3111244
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AA seq
838 aa
AA seq
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MSSDTDSTTMQCLRPLRPSGGKMQGDLGSQRSFSVLDRLLHTHPVWLQLSINADSALYIL
LREPVGTFLVRKCSSSQRKLLCVRVTADRAASSIKECLICEEDSTFALESSALSFPDLCR
LVAFYCISRDVLPFPLELPEAIAQASTHRKLEAISHMGLEFWSSLSDTQNGPGDLQAPPT
IKASPITTKTPPTSAMQVKAGLSQDLCYLLSRGRQESLCFINPLFLQLEQQQQPQQSIPG
ASHKRHRFKRSMRVRVSTESSMTLSGCGGGGGGAGSFPLPPPENPKDQERLQPTPLQPSP
KPHRKVHPGAGVLRKTPALSPMSAEDEDLVPVPPAVPTDPPVGEVEEDPSAPEEPSIEEA
CLALAGHPAPSLAQLDSSSSFSSLEEEDPGAEAEDQFFKQPNPNPQHRPPLVRSRGGHGG
LQRMSAAFVCFFAPEKRLARLVEELSRERRSAFGSLVQEFLQKQKEELRGVLTQAASSSS
SSSPKSSLAVLQGLRCFLSQAKSFLLDSGELSPPLETLVPDNEKDIALEKAMFGCVLKPL
RVLLDQALLSLHRQDGSTQHLASSLLACQEGAMERLGVLVGVPDTRGVERVRQKLGLMQR
THSPIDKVLLLLQVCKSVQKAMGALHNGGQEVSSEDFLPALSYVIVMCNTPQILLEVEYM
MELLEPSWLTGEGGYYLTSVYASLCLIQSPEAKGDQVPPGGLTREALDRLRKWGRRRSLE
AKSNRERQQNQRCVRVLFQDGERSAVRTLQWRAGESSEALARLCASTFGVSEPQDYTLYW
RSGGEMRTLPTQTQPQDLASHSEGGPSLSYLRTDHDFSKMRRLTRGGAVDLGESVCEE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgacaccgatagcactacgatgcagtgccttagaccactgcgtccctcggga
ggcaaaatgcagggggatctagggtcccagcggagtttcagtgtgttggaccgactcctc
cacacacaccccgtctggctgcagctgtccatcaatgctgactccgccctctatatcctg
ctcagagaacctgtcgggacattcctggtgcgtaagtgcagctccagccagaggaagttg
ttgtgtgtcagagtgaccgcagaccgagcagcatcctccattaaggagtgtctcatatgt
gaggaagactccaccttcgccttggagagctccgccctcagcttcccagacctctgccga
ttggtggccttctactgcattagcagggatgtgctgccttttccactggagctcccagaa
gccattgctcaggcctccacccacaggaagctggaggccatctcccatatgggattagag
ttctggagttcactctctgacacccagaatggacctggggatctacaggctccacccacc
atcaaggcttcacccattaccaccaagactccgcccaccagtgccatgcaggtcaaggcg
ggtctgtcccaggacctgtgttacctgctgtcccgcggcagacaggagtctctctgcttc
attaaccctctctttctccagcttgagcagcaacagcagccgcaacagtcgatcccgggg
gcgtcccacaaacgccaccgcttcaaacgcagcatgagggtccgtgtctctacagagagc
tccatgactctgtctggttgtggaggtggtggagggggggctgggtcgttccccttgccc
ccaccggagaaccccaaggaccaggagaggctccagcccacacccctccagcccagtccc
aaaccgcacagaaaggtccatcctggggctggcgtcctgaggaaaacccctgcactgtcc
cccatgtcggccgaggatgaggacctcgtgcctgtaccgccagcggttccaacagatcct
ccagtgggggaggtagaggaggacccatctgctccagaggagcccagcatcgaagaggcg
tgcttggccttggcgggccacccagccccctctctggcacaactggacagcagcagctct
ttcagcagtctggaggaagaggatccaggagcagaagcagaggaccagttcttcaaacaa
ccaaaccccaaccctcagcaccgcccgcccctggtgcgctcgcgggggggtcacggaggc
ctgcagaggatgagcgcggcgtttgtgtgtttctttgctccagagaagaggctcgccagg
ctggtggaggagctatcccgggaacggaggtctgcgtttggatccttggtccaggagttc
ctccagaagcagaaagaggagctgagaggggtcttgacccaggctgcctcttcatcgtcg
tcttcctcgccgaagtcctccttggcggtgctccaggggctgcggtgcttcttgtcccag
gccaagagcttcctgctggacagcggagaactgtcgccccccctagagaccctggtgccc
gacaacgagaaagacatagccctggagaaggccatgtttggctgtgtgctgaaacctctg
agggtgctgctagaccaggccctcctctccctccacagacaggacggctccacccagcac
ctggcctctagtctcctggcctgccaagagggggcgatggaacgcctcggagtgctggtg
ggcgtgcccgacacacgcggagtggagagggtgaggcagaagctgggcctcatgcagcgc
acccactcacccatagacaaggtgctgctgctgctgcaggtctgcaagtcggtccagaag
gccatgggggccctccacaacggtggacaggaagtgagctctgaggacttcctgccggcg
ctgtcctatgtgatagtgatgtgtaacacgcctcagatcctactggaggtggagtacatg
atggaactactagagccctcctggctcactggggagggtggctactacctgaccagtgtc
tatgccagcctctgtctgatccagagccctgaagcgaagggggaccaagtccccccagga
ggtctgacccgcgaggccctggacaggctgaggaaatggggccgcagacgcagcctggaa
gccaagagcaaccgtgagagacaacagaaccagaggtgtgttcgggtactgttccaggac
ggcgagcgcagcgctgtgcggacgctgcagtggagagccggggagagcagcgaggcccta
gcccggctctgtgcctccaccttcggcgtctccgagccccaggactacaccctctactgg
aggtccgggggggagatgaggacccttcccacccagacacagcctcaggacctggccagc
cacagtgagggaggaccctctctctcctaccttcgcacggaccacgacttcagcaagatg
cggcgcctgaccagagggggagctgtggacctgggggagtccgtgtgtgaggagtga
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