Oncorhynchus nerka (sockeye salmon): 115139080
Help
Entry
115139080 CDS
T07952
Name
(RefSeq) zinc finger and BTB domain-containing protein 38-like
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115139080
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139080
04121 Ubiquitin system [BR:
one04121
]
115139080
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115139080
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115139080
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115139080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-H2C2_2
zf-met
BTB
Motif
Other DBs
NCBI-GeneID:
115139080
NCBI-ProteinID:
XP_029532111
LinkDB
All DBs
Position
LG12:12460231..12470318
Genome browser
AA seq
1864 aa
AA seq
DB search
MSFHAVLACFEGWSWCLSRSSTWPPGPPSSVTSTSSPPAPPAASTSASCCCRRLPHRLRI
RYWTPVINPLFWGAERVLELPHLQSRVLSNLLDFIYTSHVLRRDDKGKRLLSEAGLSLGV
PFLTHLVKEEEEEPGEMKGKSRQGRGGEAMMEDGACGPENAKITLSFPLSAALPAALTVH
NHRPSSAMSSPRCRHSSSGSKGSNEGSSWKLAAAATTDKRRPFKQPRHDSSPCSSSSSHS
SSSSPMDLTALVKKDTKSPPPLFKAGLDSQFHRFTPRSSNGPIVGYPGEGHRLTNGTASP
SDTAQILFNLSAVAYQSQGRQGTERKEKTGKQGGRVGSPQVGPNLHPPTLHLPPLPHPSS
SFIPPPLPPHASSTPPDGPKAELICGVCHRLFSSASSLTAHLRLHRGGRALSCQHCGKAF
IHNKRLQSHEASCRHALTPAIPSNLPHLPIQPKEEPLEEGEVRVEGGQILGAGEEDMKPG
KGKKGRGLLVRHEGDVSELVGDEDHFVKVVDGHVIYFCSVCERSYMTLSSLKRHSNVHSW
RRKYPCHFCDKVFALAEYRTKHEVWHTGERRYQCIFCWEAFATYYNLKTHQKAFHGISPG
LISSEKTANGGYKQKVNALKFYRLLPMRSQKRPYKTYSDSLANGLQLPPSDPSSVPLPLD
CSLPDSLDPGDLRSLISGSLPKGVKPDPEEFLASFPLTVALEQGEIRLPSLTDMALGRVA
DREPASEKVGSRGSSSKVSVGNRVKTPKVSGSPELGLSSVITYGHPKPSVIVHGTAVSSV
IVHSNQVTSGGGKSPLSSPSPESSNSQTLLPKSSAKPVKKHRESTESHRKRAKLVDSSDA
TEESERRSETGRSHHKSSKSDGSSAKQSSEGKGAGPLCQITVRIGEEAMVKRSISETDLK
RDRSPPPSKAKRTYSSPLETKEPRHSHHHHHHHHHKHRSHRSSSTGAEGERGGDGESRKK
SPIAPGKVREYYFRQEVRKQGESEDDEDNLWRPYYSYKPKRKAPHVHKAKNWQAKLHYKR
SLRLMKRAEGIMDHVNKEAGEQDEEDGTMDEVEGEVEGHIEQEKGEVPESLSISPIPSKD
KEGEEEIQEAHLKTTDPPLASPQPPLATSVSPMDTKRRPWSDGSASECDTCGRWFSSSRK
RDKHELSHLLEFVCLLCRAPFPSRDQLEDHQRTRHPKDPDPLSVPPRAGPQSRDEGVERE
TKLAEVDRARERVILGKGSPSRLSRRSLARHTCLQCHKVCKTSSALNRHVRRHELSSSPE
REREETQPEPKAAAETTVSTASKDLDTMSGHVPVVQSVPAISYPVPEPQHSSEGIEAQQC
ASQPSKVKAEHHIPTLCSSPELHELATPVPDREPSPLIIQPPSEIPMVDIPDSNRPTPSP
SSCTSPLQGVLVMSSGAECLDYRTPRKRSLEGQSHRKTSPAPVTGPPTAFLNMHLTSQMR
INHTAAPPSVAMTTVPLRGVCGVKREGDIVEKGLRQGCGMGLLHHAGFKDSPVAQDVRVL
PLSRSPSPNQAQDLTMSSILAREVERERQREWERDMERELERGRQRERERDMDRELERGR
QRERNMDRVLERERRREREMERVQQTRGASQPPQEQLRDKEVILLVPKEEPISPAPSPIH
TPIQTTINNRPLQRRPTVSPCLSPTAMDLLMQANRQVSQSMCGTRGPERLQLPTGSVGGI
DRPSAHALLLPRVPPPSEAEPQDHSPAPSRDPHRGEVIARGYPMQDYPLPLIVQSGYCSG
KKQEDNLLMSYPTGPLAFGPLGKMMPTGDLAKLPFYPDPYHLLYGPQLLAYPYNLASLPM
ALNMMAPGDDKVAPLPFLPALFNYAAAAGPYTGMLPHHLVANPSLYNSGGSSRKQRDGSG
GGKP
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcacgctgtgttggcctgttttgagggctggtcatggtgcctcagccggagc
agcacctggccgccgggcccaccctcttctgtgacgtcaacctcgtcgccgccagcaccg
cctgcagccagtacttccgccagctgctgctgtcgacgtcttccccaccgccttcggatc
cggtattggacacccgtcatcaaccccctcttctggggggctgagcgagtcctggagctg
cctcacctccagtcgagagtgctgtccaacctgctcgacttcatctacacctcccacgtc
ctccgccgggacgacaaggggaaaaggcttctctcagaggcgggcctcagcctcggggtg
cccttcttgacccacctggttaaagaagaggaggaggaaccaggggagatgaagggtaaa
agcaggcagggccgaggaggggaggccatgatggaggacggggcatgcggcccagagaac
gctaagatcaccctcagcttccccctcagtgccgccctgcccgccgccctcaccgttcac
aaccaccgcccctcctcggccatgtcctcccctcgctgccgacactcctcctcgggctcc
aaggggtccaatgaggggtcgtcatggaaactggccgccgccgccaccacggacaaacgg
cggccgtttaaacagccccgacatgacagctctccatgctcttcctcctcctcccattcc
tcttcttcctctcccatggatcttaccgcactggtcaaaaaggacaccaaatccccccca
cctcttttcaaagccggtctggactcccagttccacaggttcacccctaggtcctccaat
gggcctatagtgggttacccaggggagggtcacagactgaccaatggcacagcctccccc
tcagacactgcacagatcctgttcaacctgagcgccgtggcctatcagagccaggggagg
cagggcacagagagaaaggagaaaacaggaaaacaaggagggagggtgggcagcccacaa
gttggaccaaacctccacccgcccaccctccaccttcctcctcttcctcacccttcctcc
tctttcatcccacccccccttcctccccatgcctcctccacccccccagatggccccaag
gcggagctgatatgtggggtgtgccaccgcctcttcagctccgcctcgtctctcacggcc
cacttgcggctgcaccgtggcggccgggccctaagctgccagcactgtggcaaagccttc
atccacaacaagagactgcagtcccacgaggcctcctgcaggcacgctctgaccccggct
atcccctctaacctcccccatctccccatccagccaaaagaggagcccctggaggaaggg
gaggttagggtggagggtggacagattctgggggcaggcgaggaagatatgaagcctgga
aaagggaagaaagggcgaggtctcctagttcgacacgaaggcgacgtgtccgagctggtg
ggggacgaggaccacttcgtcaaggtggtggacggccacgtcatctacttctgctcggtg
tgtgagcgctcctacatgaccctgtccagcctcaagcgccactccaacgtgcactcatgg
cgccgcaagtacccctgccacttctgcgacaaggtgtttgccctggccgagtaccgcacc
aaacacgaggtgtggcacacgggcgagcgacgctaccagtgcatcttctgctgggaggcc
tttgccacgtactacaacctgaagacccaccagaaggctttccacggcatcagcccgggc
ctcatctccagcgagaagacggctaacggcggctacaagcagaaggtcaacgcgctcaag
ttctaccgcctgctccccatgcgttcccagaagagaccctacaagacttacagtgactcc
ctggccaatggcctgcagctgcccccttccgacccctcttccgtccctctgcccctggac
tgcagcctgcctgactccctggaccctggtgacctgcgcagcctcatcagtggctctcta
cccaagggtgtgaagccagaccctgaagagttccttgccagcttcccactcacagtagcc
ctagagcagggagagatccgtctcccttccctaacagacatggccctagggagagtagca
gacagagagccagcatccgagaaggtaggtagtcgtggcagcagctccaaggtatccgtt
ggcaacagagttaaaactcccaaggtcagcggtagcccagagttgggtttgtcctcggtg
atcacgtacggacaccccaagccatcagtcatagtgcacggcacagcagtgtcatccgtc
attgtccatagcaaccaggtcacctccgggggtgggaaaagccccctgagcagtccctcc
cctgaatctagcaacagccagacactcctccccaagagcagtgcaaagcctgttaaaaag
catagggagagtacggagagccataggaagagagctaaattagtggacagttcagatgcc
acagaggagtcggagaggagatcagagacgggtaggtcccatcataagtccagcaagagt
gacggctcctcagccaaacagtcgtcagagggcaaaggagccgggccgctgtgtcagatc
acggtgcggataggcgaggaggccatggtcaagcgcagtatctccgagacggacctcaag
agggacaggagcccccctccttccaaagccaaaaggacatactcctccccactggagacc
aaggaacctcgccactctcaccaccaccaccaccaccatcaccacaaacaccgctcccat
cgcagctcgagcaccggagccgagggggagagaggaggagatggggagagcaggaagaaa
agtcccatagccccgggcaaggtcagagagtactacttccgccaggaggtgcgcaagcag
ggggagagtgaggacgatgaggacaacctctggaggccctactactcctacaaacccaag
aggaaggccccgcacgtccacaaagcaaagaactggcaggccaaactgcactacaaacgc
tccctccggcttatgaagcgggccgagggaatcatggaccatgtaaataaggaggcaggg
gagcaagacgaggaggatggaacgatggatgaggtggagggggaggtggaaggtcacata
gagcaagagaagggagaggtacctgaatccctcagtatttcccctataccttcgaaagac
aaagagggggaggaagaaatccaggaggcccaccttaagaccactgatcctcccctggct
tccccccaaccccctctggctacctcagtctcccctatggacacaaaacgccgtccctgg
tccgatggcagcgcgtcggagtgcgatacgtgtggccgctggttctccagctccaggaag
cgggataaacacgagctcagccacctgctggagtttgtgtgcctcctttgtagggcccct
ttcccttccagggaccagctggaggatcaccagagaactcggcaccccaaagaccccgac
cccctgtccgtgccaccccgagcgggacctcagtccagagatgagggcgtggagagggag
actaagctggcagaggtagaccgggcgagagagagggttatactagggaagggaagtcca
agtcgtctaagcaggaggtcgttggcgagacacacctgtttgcagtgccataaggtatgc
aagacatcctcggcgctaaaccgccacgtgaggcgccacgagttaagcagctccccggag
agggaaagggaggagacccagccagagccaaaagcagcagcagagactacagttagcact
gctagcaaagacctcgacaccatgagtggccatgttcccgttgttcagtctgtcccagct
atcagctaccctgtcccagaaccacagcatagcagcgagggcatagaggcacagcagtgc
gcgagccagcctagcaaagtgaaagcagagcaccatattccaacactgtgcagcagccct
gaactccatgaactcgccactcctgttcctgaccgagagcccagtccactgattattcag
cccccttcagagatccccatggtcgatatccccgattctaacaggcccacaccctctccc
tcctcctgcacctcgcccctccagggtgtgctggtcatgagcagtggagctgaatgtctg
gactaccggacccccaggaagaggagtctggagggacagagtcacaggaagaccagccct
gcacctgtcacgggaccacccaccgcttttctgaacatgcacctgacctcgcagatgaga
atcaaccacactgctgctcctccgtccgttgctatgacaacagtgcccctccgaggggtc
tgtggcgtgaagcgggagggagatattgtggagaaaggactgaggcagggatgtgggatg
ggcctcctccatcatgctggttttaaggactcaccagtggcccaagatgtcagggtcctg
cccttgtcccggagccccagtcccaaccaagcacaagacctgactatgtcctcaatccta
gccagagaggtggagagggaaaggcagagagaatgggagagggatatggagagagagctg
gaaagggggaggcagagagaaagggaaagggatatggacagagagctggaaagggggagg
cagagggagaggaatatggacagagtgctagaaagggagaggcggagagaaagggagatg
gagagggttcagcagactaggggggcatctcaacccccacaggagcagctcagagacaag
gaggtgatcctcctggtacccaaagaggagccaattagtcccgcaccgtcccctatacac
acacccattcaaaccactattaacaaccgtcccttgcagaggcggcccaccgtgtcccca
tgcctctcccccactgccatggacctgctgatgcaggccaaccgccaagtttcccagtcc
atgtgtggcacacggggccccgagaggcttcagttgcccactgggtcagtcggtggcatc
gaccgcccctcggcccacgccctactgctcccacgggtccccccaccgtccgaggcagag
ccccaggaccactccccagcgccatccagagaccctcacagaggggaagtcattgccagg
ggataccccatgcaggactaccccctgcccctcatcgtccagagcggctactgttctggc
aagaagcaggaggacaacctgctcatgtcttacccaaccgggcctcttgccttcgggccg
ttggggaagatgatgcctaccggggacctagccaaactgcccttctacccagacccgtac
catctgctctacgggccgcagctgctggcctacccctacaacctggcctccctgcccatg
gctctgaacatgatggcccctggggacgacaaggtggcgccgctgcccttcctccctgcc
ctcttcaactacgctgctgcagctggtccctacactggcatgttgccacaccacctagtg
gccaaccccagcctctacaacagtggtggcagcagtagaaagcagcgggacggcagcggc
ggcggcaagccgtag
DBGET
integrated database retrieval system
