Oncorhynchus nerka (sockeye salmon): 115139084
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Entry
115139084 CDS
T07952
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115139084
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
Others
115139084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
115139084
NCBI-ProteinID:
XP_029532113
LinkDB
All DBs
Position
LG12:complement(15443509..15784623)
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AA seq
1158 aa
AA seq
DB search
MSAIGLMARSMVSLRPKGIVSAHLCLAVVIAWMSLMRPMLCDSGVLHRSDGDRLLDSRGA
VGIDGVDGVFGPGLGDNDGDAGDVESPRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHW
TGENSSVILILTKYYHGDSSKVLESSLWRSSDYGTTYSKLNLMPGTTIVVSNFYICPINK
KKVILVSSSINERDQMLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYV
STDLGRKWTLMQERVTKDRIYWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMV
TAQFLGKIDHNSLSVQDDYVFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVHIVST
DESQVFLALQEWYQTDTYNLYQSDPQGVYYSVVLENVRSAKQPEESALIDILEVRGVKGV
FLANQKVDGKVTTLITYNKGRDWEPLAPPTTDMNGKPVTCQSPDCHLHLHLRWADNPYVS
GTVHTKDSAPGLIMGAGEVTNTRTPSQFASEQALARPFSLKPIDFSRAVVIVSMFFFLLR
FSIDEGRTWIIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPR
QCTEADYDSWKLTDLKGEKCIMGQERSFRKRKDTAFCIKGKSYTSALTTKTCQCSEKDFN
CDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHLGHDFESSTGYRKVVSNMCEGGVNKQ
QSAKQHTCPLLPPRGLQLGIKGQILAVAPGDDITFIVHQEQGDTSNTKYQVDLGDGVRAI
YQNLTVTDEPIQHRYEQLGVYRVTVKAENMAGHDQATMYIQVTAPLQEVHLEVVPIAGVN
QEVNLTAVVLPSEANLTVFYWWIGDNLQPKLSLENSLITRFPAEGEVSVTVQASNGRSMV
QDTKTVRIYDLFQVIPLAFSSNLDLLNPNIPEWREDVGQVVTRILAKITGVPQESLVTMV
KPGLPTTAELYILPPESKPAKRSVFVDKRIPAIKQAFNENNVSFIVRGGLQVLVTLADPN
AGLVANDSSLRATEIGSQGGVAGPGVWALAVIFLISVIATGSFILYKFKSPWLRTEDAYP
PLFFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAGGNH
SGVVLSINSRELHSYLTS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataggcctaatggcgcgaagcatggtatctctgcgtccgaaaggaatcgtt
tcagcgcacctgtgcttggccgtggttatcgcctggatgtcattgatgagacccatgcta
tgtgacagcggcgttttacaccggagcgacggggatcgtctgcttgacagccgcggcgct
gtaggcatagacggggttgacggagtgttcggaccgggcttgggtgataatgatggggac
gcgggcgacgtggaatccccgcgcttcaggagagcactatcccaagagaaagtgtccctg
ctcagcagctcgttcgtgctcaaaggggatgctactcacaaccaggcgatggtgcactgg
actggagagaacagcagcgtcatcctcatcctgaccaagtactaccacggtgactccagc
aaggttctggagagctccctctggaggtctagtgactatggcaccacctacagcaagcta
aacctgatgcctgggacaactatcgtggtctctaacttctatatctgccccatcaacaag
aaaaaggtgatcctagtgagctcgtccattaacgagcgtgaccagatgctgttcattagt
acagacgagggctcctcgttccagcgacagcccctgtccttcaccgcggagaccctcctc
ttccaccccaaggaggaggacaaggtgctggcttactgcaaggagggaaagctctatgtg
tccacggatttgggccggaagtggactctaatgcaggaacgagtgaccaaggacaggata
tattggtctgtggctggtgtagatgtggaccctgacttggtgcatatggagatgcaggac
acaagtggagggtacctgtacgtgacctgtctgatccagaactgctcagacaagatggtg
acggctcagttcctggggaagatcgaccacaactctctctcagtccaagacgactacgtc
tttgtcaaggtgaccacaggaaaccgcaccaagcactacgtttcataccgacggaatgag
tttgtccagatgaggttccctaaatacgccctaccaaaggacgtccacatagtgagtacg
gacgagagccaggtgttcctggccctgcaggagtggtaccagacagacacctacaacctg
taccagtcggacccgcagggcgtctactactccgtcgtgctggagaacgtccgcagcgcc
aagcagccggaggagagcgcccttatagacatactggaggtccgcggggtcaaaggcgtc
ttcttggccaatcaaaaggtggatggcaaagtgacgactctcatcacctataacaaaggc
cgagactgggaaccccttgccccgcctaccactgacatgaacggcaagccagtcacctgc
caatcacctgactgtcacctccacctccacctgcgctgggctgacaacccttacgtatca
gggaccgtccacaccaaagactccgcccccggactcatcatgggtgcaggtgaggtcact
aacactaggaccccctcacagtttgctagtgaacaggctctggctaggccttttagccta
aagcccatagacttcagtagagctgttgtaattgtgtctatgtttttttttctccttagg
ttcagtatcgatgagggaaggacgtggatcatccacaacttcaccagcacctcggttttc
gtcgatggacttctgagcgaaccgggagatgagaccctggtcatgacggtgtttggtcac
atcagttaccggtcagactgggagcttgtcaaggtggacttcagacagtcattccccaga
cagtgtactgaggccgactacgactcctggaaactcactgacctgaagggagagaagtgc
atcatgggtcaggagaggagttttaggaagaggaaggacaccgcattctgcatcaagggg
aagagctacacctccgccctcactaccaagacctgccagtgctccgagaaagacttcaac
tgtgactatgggtttgagcgtgcccagagcctgaagaccgagggagatagatgctttgct
gacttctggcacgacccagactcgccacctgacgactgccatctgggacatgacttcgag
tccagcacagggtacaggaaggttgtgtccaacatgtgtgaggggggagtaaacaagcag
cagagcgccaagcagcacacctgtcctctgctgcctcccagaggcctccagctgggtata
aaggggcagatactggctgtggcgcctggtgatgacatcactttcatcgtccaccaggaa
cagggtgacaccagcaacactaaataccaggtggacctgggtgacggggtgagggccatc
taccagaacctgacagtgacagacgagcccatccagcaccgctacgaacagctgggggtc
taccgtgtcactgtcaaggccgagaacatggccggacacgaccaggccaccatgtacatc
caggtcacagcccctctacaggaagttcacctggaagtagttcccattgccggggttaac
caggaagtcaacctgacagctgtggtgcttccttcagaggccaacctgactgtcttctac
tggtggataggagacaacctacagcccaagctgtccctggagaatagtctgataacgcgg
ttccctgcggaaggagaggtgtctgtcactgtccaggcctctaatggacgctccatggtg
caggacaccaagacagtccgcatctacgaccttttccaggtcatccctctggccttcagc
agtaacctggacctcctcaaccccaacattccagagtggagggaggacgtgggtcaggtg
gtcaccaggattctggccaagatcacaggtgtcccccaggagtccctggtaaccatggtg
aagccgggcctgcccaccacagccgagctgtacattctcccaccagagagcaagcctgct
aagaggagtgtatttgtggataagcgtatccctgccattaagcaggccttcaatgagaac
aacgttagcttcatcgtacgaggaggtctacaggtgttggtgaccttagctgatcctaac
gcaggactagtagctaatgactcgtccctgagagcgacggagatcggttctcagggtgga
gtggcaggtccaggtgtctgggctctggctgtcatcttcctcatcagcgtcatcgctact
ggatccttcatcctctacaagttcaagagtccttggcttaggactgaggatgcctatcct
ccactatttttcagaaagctgcctggccgaaatgtgtatgcccagatgcacaacgagaag
gagcaggagatgaccagccctgtcaatcacagcgaggacacgcagcacatcatccagggg
gaggagtttatcgacgacgatctggactcgcagactctaggtaacgcaggaggtaaccac
tcgggtgtggtgctgagcatcaactccagagagctgcacagctacctgaccagctga
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