Oncorhynchus nerka (sockeye salmon): 115139239
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Entry
115139239 CDS
T07952
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03410
Base excision repair
one04210
Apoptosis
one04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115139239 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115139239 (parp1)
04217 Necroptosis
115139239 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115139239 (parp1)
03036 Chromosome and associated proteins [BR:
one03036
]
115139239 (parp1)
03400 DNA repair and recombination proteins [BR:
one03400
]
115139239 (parp1)
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
115139239 (parp1)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115139239 (parp1)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115139239 (parp1)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
115139239 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
115139239
NCBI-ProteinID:
XP_029532263
LinkDB
All DBs
Position
LG13:6688075..6700097
Genome browser
AA seq
1013 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAQSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTIDPEKPQLGLIDRWYHTACFVGRREELVFKPEYSAAQ
LKGFNTLRVEDKEELKRRLPVVKSKGKRETDEVDGEGSSKKKKDEEEKKKVDLQMKEQSQ
LIWGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALKPCEECQGQLV
FKSDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELPFLKKFKFKRQDRVFPKVAPP
PASSASAPVPSASSAPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQAQSAASRSGAMAGKSTKRVKEEEGVSKASKKMKLTVKGGAAVDPDSCLEN
SAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGNKL
DKFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTASAGT
NSLLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVS
DSSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLKGG
AEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFKIVR
EGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDPSAT
VTLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgcaaggaaaacatagcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgacggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccagtctcctgcagacatcgctggattctctgaccttcgatgggaggac
caggagaaggtcaagaaggccatcgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggggagaagactctgaatgactttgcagtggagtatgccaagtcc
aatcgcagcacttgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacgattgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgtgggccgcagggaggagctggtcttcaaaccagagtacagcgccgctcag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggttgccc
gtcgtcaaatctaaaggaaagagagagactgatgaggtagatggagaagggtcatcgaag
aagaagaaggatgaggaggagaagaagaaagtggacttgcagatgaaggagcagagccag
ctgatctggggcatcaaggacaagctcaggcagttctgttccaccaacgacatgaaggag
ctgctcatcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagccta
ggagactgcatggcctttggcgcactgaagccctgcgaggagtgccagggccagctggtg
ttcaagagcgacgcctactactgcactggagacctctccgcctggaccaagtgtgtgttt
aagactcagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttccc
ttcctcaagaagttcaagtttaagagacaggaccgggtgttccccaaggtggcccctccc
ccagcctcttctgcatccgctcccgtccccagtgcctccagtgctcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggatgagctgaaggctgctgtggaggagctgggcgggaagatcact
ggcacagccaataaggctactctctgcctcagcaccaagaaggaggtagagaagatgagt
aagaagatggaggaggcagaggaggcgggcgtgcgcgtggtttcagaggacttccttact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcacgccatctccccc
tggggggccgaggtcaaactagagacccaggctcagtcagcagcctccaggtctggagcc
atggctggcaagagcaccaagagggtgaaggaggaggaaggtgttagcaaggccagtaag
aagatgaagctgactgtgaaaggaggggcagcagtggacccagactcatgtctagagaac
agtgctcatgtcctggatcagaatggcaagatcttcagcgctacgctaggtctggtggac
atcgtcaggggaaccaactcctactacaaactgcagctgctggaggacgatgtgcataaa
cggtactgggtgttccgctcctggggcagagtgggcaccaccatcgggggaaataagctg
gataagttccatgataagaactctgccatggacaacttcctgggtgtgtacgaagagaag
acaggcaacgcctggggctcttcccacttcaccaagtatcccaacaggttctaccctctg
gagatcgactacggtcaggatgaggaggcggtgaagaggctgacagccagtgctggcaca
aactctctgctggccaagcctgtccaggaactcatcaggaccatctttgatgtggagagc
atgaagaaggccatggtagagtttgagattgacctccagaagatgccgctggggaagctg
agtaagaggcagattcagagtgcctacgccctcctcagtgaggtgcagcaggctgtgtcg
gacagttcctcagagtcccacattctggacctgtccaatcgcttctacaccctcatacct
cacgactttggcatgaagaaaccaccgctgctcagcaaccttgactacattcaggctaag
gtccagatgttggacaacctactggacattgaagtggcctacagtctcctgaaaggaggg
gccgaggataacaagaaggaccctatcgacatcaactatgagaaactcaaaaccaagatt
gaggttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtcaagaacaca
cacgctgctacacacaacacctacacactggaagttgaggagatctttaagatcgttagg
gagggagagtaccagaagtaccgccccttccaggatctgcccaatcgacagcttctgtgg
cacggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgtatcgcccct
cctgaagcccccgtgacgggctacatgtttggcaaaggtgtgtactttgccgacatggtg
tccaagtcggccaactactgccacacctcccagtccgacccaactggcctacttctactg
ggagaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacatcacaaaacta
cccaagggtaaacacagtgtgaaaggtttgggtcgaaacgccccagatcctagtgccact
gtcactttagatggggtgcaagtgcctctgggaaaaggaaccaacaccaacattgacgac
acgagtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaacctgaagtac
ttgctgaagatcaagttcaactaccagatgtccatgtggtga
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