Oncorhynchus nerka (sockeye salmon): 115139262
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Entry
115139262 CDS
T07952
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115139262 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139262 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115139262 (esr1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115139262 (esr1)
Nuclear receptors [BR:
one03310
]
3. Estrogen like
3A. Estrogen receptor
115139262 (esr1)
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Ortholog
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Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
115139262
NCBI-ProteinID:
XP_029532303
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Position
LG13:complement(7621613..7645274)
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AA seq
619 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESHFISPPKLSPQQPTTPNSNMYPEETRGGGGVATF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRLLRKDKRYWGPAGDREKPYGDLEHRAAPPQDGGR
NSSSSSLNGGGVWRGPRITMPPEQLLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMA
DKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIPSPGKLIFAQDLIL
DRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLH
NSSAVESMLNNITDALIHHISQSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKC
KNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQIEGPSTTTTTSTGSSIGPMQDSQDTYIRS
PGSGVLQYGSPSSDQMPIP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacttcatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggtggccaccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaagccaccatggtctccccagccagtcatactacctggagacctcgtcc
acacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcgactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgcggtgggcggcttctcaggaaggataagcggtattggggccctgctggtgac
agagagaaaccctacggtgacctggagcacagggcagcgccccctcaggacgggggtagg
aacagcagcagcagcagtctcaatggaggtggagtatggcgtgggcccagaatcaccatg
cctcctgaacagttgctgttcctgctgcagggggcagagcctccggccctgtgttctcgt
cagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggct
gacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctg
tctctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcgga
ctcatatggcggtccatccccagccctgggaaactcatcttcgcccaggacctcatactg
gacaggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggcc
actgtgtctcgcttccgcatgcttaaactgaagcctgaggagtttgtgtgcctcaaagcc
atcatcttgctcaactctggtgccttctccttctgttctaactctgtggagtccctccac
aacagctcggcagtggaaagcatgctgaacaacatcaccgacgccctcatccaccacatc
agccagtcaggagcctctgtgcagcagcagcccagacggcaggcccagctcctgctcctg
ctctcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgt
aagaacaaagttcctctgtacgacctgctcctggagatgctggacggtcaccggctccaa
tccccaggcaaagtggcccaagctggggaacagatcgagggcccctctaccaccactacc
acctccacaggctccagcatagggccgatgcaagacagccaggatacctacatcagaagc
cctggttccggggtactccagtatggctcccccagctcagaccagatgcccattccgtga
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