Oncorhynchus nerka (sockeye salmon): 115139460
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Entry
115139460 CDS
T07952
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 2-like
KO
K04601
cadherin EGF LAG seven-pass G-type receptor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115139460
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115139460
04515 Cell adhesion molecules [BR:
one04515
]
115139460
Peptidases and inhibitors [BR:
one01002
]
Mixed peptidases
Family P2
115139460
G protein-coupled receptors [BR:
one04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
115139460
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115139460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
GAIN
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
GPS
Fibulin_C
EGF_laminin
EGF_TEN
Cadherin_4
hEGF
DUF7233
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
115139460
NCBI-ProteinID:
XP_029532735
LinkDB
All DBs
Position
LG2:39468848..39569613
Genome browser
AA seq
3029 aa
AA seq
DB search
MPVIKWDLVFIIFGWFEIISLSDCYSTHISEDAEPGTVIASVEQSGACTLDQVIAPKFSK
TFIETDASARIVFISGSLNCASLSSNPFIVYTVVDCVNSGPGSRHLLTSQYDVHVHGRNC
SSKHKIKSQWDLEIISLFKAQNHQLECYEAGTALLRVWDLLPASQTHNNMHCRVTSSSDF
YFSEGQLFVSKTLCLKHDTLLELDLHCNQYTGDEREAKVNSISVHWRVGQGSFKQGHLGK
LLQQSESGIVSRRKRAVNSSPQFQPPMYQVSVAENKPAGTPVVVLKAVDSDEGEAGRLEY
FIEALFDSRSNNLFSVDPVNGAVSTVEVLDREQKDTHVFRVNAVDHGTPRRTAMATLTIT
VSDTNDHDPVFEQQDYKERVRENLEIGYEVLTVRATDGDAPVNGNVLYRVLNSNGSNDVF
EIDPRSGVIRTKGPVDREMVEAYMLLVEANDQGRDPSPRSATATVHIIVEDDNDNAPQFS
EKRYVVQVPEDMAPNTEILQVTATDQDRGSNAMVHFSIMSGNTRGQFYIDAQTGKMDLVS
QLDYEANKEYTIRIRAQDGGRPPLSNISGLVTVQVVDINDNAPIFVSTPFQATVLENVPV
GYSIIHIQAVDADSGDNSRLEYCLIEASPNLPFSINNSSGWIVVAAGLDRESVDFYNFGV
EARDHGHPVMSSSASVSMTILDVNDNNPEFTQRSYYMRLNEDAVVGTSVVTVSAVDQDIN
SVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYVLSVTASDGTRIDTAKVFV
NVTDANTHRPVFQSSHYTVNINEDRPVGTTVVVISATDEDTGENARITYFMDDSIPQFDI
DSDTGAVTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHY
LGSVMEDVPVFTSVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLD
RENMPFYNLQAFAVDKGVPALKTSVDIQVTILDVNDNPPVFEKDEFDIFVEENSPIGLVV
AHVSASDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTVLTDLDYETQSEYVIVVQATS
APLVSRATVHVKLVDKNDNVPVLKNFQIIFNNYVTDKSSSFPTGVIGRIPAHDPDASDQL
QYSFEAGNELNLVILNQSTGEIHLSQALDNNRPLEASMRISVSDGIHSVSAQCLLQVTII
TDEMLSNSITLRLANTSQEHFLSLLLAQFLEGVACVLSADREDVVVFNIQDDTDVSARIL
NVSLSVAVPREGPRGGGEGSRGDGRVDRGTAGANGAAEYFGSEELQERLYLNRSLLAHIS
SQQVLPFDDNICLREPCENYMKCVSVLKFDSLAPFVASDTILFRPIHPIAGLRCRCPTGF
TGDYCETEIDLCYSKPCGTHGLCRSREGGYTCECLDDYTGKRCELSCRSGRCAPDVCKNG
GTCVNLLVGGFKCECPSGSYEKPYCEMTTRNFPLQSFLTFKGLRQRFHFTLSLSFATKEP
NGLLLYNGRFNEKHDFIAVEIVNEQIQLTFSAGETKTTVSPHILGGVSDGQWHVVQVYYY
NKPIINQAGMPQGPSDQKVVVVSVDNCDTSVALRFGHVIGNYTCSAQGSQSGSKKSLDLT
GPLLLGGVPKLPEDFPIQNRQFVGCMKDLRIDNRHIDMASFIANNGTLPGCSAKRHFCNN
NPCMNGGTCVNLWGSFSCDCPLGFGGRNCEKVMANPQRFLGNSLLQWTNLAAVVTVPWHV
ELMFRTRQPSATLLHVTAGQHHNLTLQLREGSVVMGLQRGEDSTLSRVEEVTVNDGDWHH
LQLELKGVPGGAPRHKAVLSFDHGLYTASMEVDNKLKGAKVKTLSVGGITGADGKIHHGF
RGCVQGLLVGETSSSSVPLSMSQARRVNMEQGCSVPDPCVSNTCPPNSYCSDDWDSHSCT
CLTGYYGDNCIDICALNPCEHQSACTRKASSSRGYTCDCPSNHFGQYCERKTDLPCPRGW
WGHKTCGPCDCQTDRGFNADCNKTSGECRCKDNHYRPEASEACLLCECYPVGSFSRACER
ESGQCQCKPGVIGRQCDRCDNPFAEVSPNGCEVIYDSCPQAIEAGIWWPRTKFGLPTAVS
CPKGSIGTAVRHCDEHKGWLPPNLFNCTSVTFTKLKALSEKLARNMSLLDSGRVQQTAAM
LANATLHTVEYYGSDVKVAYRLTQSLLKYESHQQGFSLTATQDVLFTENLVRVGSAILSP
GTRPHWELIQQTEGGTAALLRQFEQYTNTLAQNMRKTYLSPFTIVTPHIVISIDRLQKMN
FPGAKLPRYQSLRGLRPQDQETAVTLPDSVFEPPLETKGHRHLDTFPEPFLRNHTSNRKR
RHRGPDDPEQEAIASVIIFHSLASLLPESYDPDKRSLRVPKRPVINTPVVSITVHDNEEL
LQHTLDKPITVQFRMVTAEDRSKPICVFWNHSILAENGGWSAKGCEMVFRNNTHISCQCY
HMTSFAVLMDVSRRENGEILPVKLVTWSTVGVTLVFLFLTTLFLLCLRAMHCNKTSIINN
GATALFISELIFILGINLPDNPFMCTIIAILLHFFYLCTFSWLFLEGLHVYRMLSEIRDI
NYGPMRFYYMIGWGVPAFITGLAVGLDPEGYGNPDFCWLSMYDTLIWSLAGPIAMVVFMN
IFLYILASRASCSIRHHSFEKKEPPVSGLRTACGVLLLVTVTCLLAVLSVNSDMIIFHYL
FAGFNCLQGPFIFFFRIVFNKDARKAMRYCCSRKRPDHMIKSKPSSYNCTTSYMDGRLYH
LPFGDSSVSLNGTLQSGKSQQSYVPFVLRDDGGLNNSQAHIALNEHGSLFHETKEHLDNP
NSDSDSDLSLEDDQSGSYASTHSSDSEEEEPYPTEECWESMASNVSKRPHPHDNNLSKLY
WPVEYMTTASNSEGLGGADRLKTESLANTELGQTRDTRGMPSERPGDKAGSYGKDNLMLL
LPSLPNLNAHPQKGILKKKQLSPIAERNGINRIHNELSKNAPGHASSQGSSSSESRGGRA
KPSLPDQLNGVGMSIKAGTVDGDSSGSES
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcattaagtgggatttggtgtttattattttcggctggtttgaaataatttca
ctgtcggattgctacagtacacacatcagtgaggatgcagagccggggacggttatagca
agtgttgaacagagcggggcatgcactttggatcaggtaatcgctcctaaattctcaaag
acctttattgaaactgatgcgtccgcgcgcattgtgttcatttcgggtagtttaaattgt
gcctcgctcagctccaaccctttcatcgtatacactgttgttgactgtgtgaacagtggc
ccagggtccaggcacctcctcacgagccagtatgatgtgcatgttcacggcaggaactgt
tcaagtaaacacaaaattaaatctcaatgggacttggagatcatcagtttgtttaaggcc
caaaatcatcagttagaatgctacgaggctggtactgcgctcctccgggtatgggatcta
ctacccgcatcccagacacacaacaatatgcactgcagggtgactagtagttcggacttc
tacttttcggaggggcagttgtttgtgtccaagaccctgtgtttgaagcacgacacactc
cttgagctagacttacattgtaaccaatacacaggagatgagagggaagctaaagtgaac
agcatttcagtccactggcgggtgggtcaaggttccttcaagcagggccacttggggaag
ttactacagcagtctgagtcgggcatagtgagcaggaggaagagggctgtcaacagtagt
ccccagtttcagcctcctatgtaccaggtgtctgtggcagagaataagccagctggaact
cctgtagttgttttaaaggcagtagattctgatgagggggaggcaggcaggctggagtac
ttcatagaggccctgtttgacagccgctccaacaacctattttctgtggacccagtcaat
ggagctgtttccactgtggaggtgctggatagagagcagaaggacacccatgtgttccgt
gtgaatgctgttgaccacggcacgccccgacgtacggccatggccaccctcaccatcaca
gtgagtgacactaatgaccatgaccctgtctttgagcaacaggactataaggagagggtc
agagagaacctggagataggctacgaggtgctgaccgtcagggccacggatggggacgcc
ccggtcaatggtaacgtcctctaccgtgtcctcaacagcaacggctccaacgatgtgttt
gagattgaccccaggtcaggggtgatccgcacaaagggcccggtggatagagagatggtg
gaggcttacatgctgttggtagaggccaacgaccagggtcgcgaccccagcccccgcagc
gctacggcaacagttcacattattgtagaggatgacaatgataatgcgccccagtttagt
gaaaagcgatatgtggtgcaggttccggaggatatggcacccaacacagagatcctgcag
gtgactgccacagaccaggacagaggaagcaacgccatggttcactttagcatcatgagt
ggcaacaccaggggccagttttacattgacgctcagacaggcaagatggacctggtcagt
cagttggactacgaggctaacaaggaatacaccatacgcatccgtgctcaggacggggga
cgcccgcctctctccaacatcagcggcctggtaacggtgcaggtggtggatatcaatgat
aacgcccccattttcgtcagcacccccttccaggccactgtgctagagaacgtgccggtg
ggttactccatcattcacatccaggccgttgacgcagactccggcgacaactccaggctg
gagtactgcctcattgaagcctcgcccaacttacccttttccatcaacaacagcagtgga
tggatagtggtagccgctgggctggacagggagagcgtggacttctacaactttggggtg
gaggcccgtgatcatggccacccggtgatgtcctcctcagctagcgttagcatgaccatc
ctcgacgtcaacgataacaacccagagttcacccagagatcatactacatgcgcctcaat
gaggatgctgtcgtgggcaccagcgtggtgacggtttctgcggtggaccaggatatcaac
agtgtggtgacgtatcagatctccagtggtaacaccagaaacaggttctccatcaccagc
cagagtggagggggccttatcactctggccctgcccctcgactacaaactggagcgtcaa
tacgtcctgagtgtcaccgcgtctgacggcacacgcatcgataccgccaaggtgttcgtc
aacgtcaccgacgccaatacccaccggcccgtgtttcagagctcccattacaccgtcaac
atcaatgaggacagacctgttggcaccaccgttgtggtgatcagtgctacagatgaggac
actggggagaacgcacgtataacctactttatggatgacagcatcccccagttcgacatc
gactctgacacaggcgctgtcaccacccagatggagctggactatgaagatcaggtgtcc
tacacgttagccatcacggcccgggacaacggcatcccacagaagtctgacaccacctac
ctggagatcctggtgaatgatgtgaatgacaactctcctcggttcctccgagaccactac
ctaggctctgtgatggaggacgtgccagtgtttaccagcgtcgtccaggtctctgccact
gaccgagactctggcctcaatggacgtgtcttctacactttccaggggggagaggacggc
gatggagacttcataattgagtccacctctggtattgtgcgaacgctgcgtcgcctggac
cgtgagaacatgccattctacaacctgcaggcctttgctgtggataaaggtgttcctgct
ctcaagacgtccgtggacatccaggtgaccatcttagacgtgaacgacaaccctcccgtg
tttgagaaagatgagtttgacatctttgtggaggagaacagcccaataggcctagtagtg
gcccacgtatctgcctcggacccagacgaggggagcaacgcccagatcatgtaccagata
gtagagggaaacatcccagaggtgttccagctggacatcttctcaggagaactgaccgtt
ctgacagatctcgactacgagactcagtcggagtatgtcatcgtggtccaggccacctcc
gccccactggtcagccgtgccaccgtgcacgtcaagttggttgacaagaacgacaacgta
ccagtgctgaaaaatttccagatcatattcaataactatgtcactgacaagtccagtagc
ttccccacaggggtgatcgggcggatccctgcccatgacccagatgcttcggaccagctc
cagtacagctttgaggctggtaatgagctgaacctggtcatcctgaaccagagcaccggg
gagatacacctcagccaggccctggacaacaacagacccctggaggcctccatgaggata
tctgtctctgatgggatccactccgtgtcggcccagtgtctgctccaggtcaccatcatc
acagacgaaatgctctccaacagcatcacgctgcgattggccaacacctcccaggagcac
ttcctgtccctgctattggcccagttcttggagggcgtggcctgcgtgctgtcagcagac
cgcgaggacgtcgtagtgttcaacatccaggatgacacagacgtcagcgcccggatcctc
aatgtcagcctgtctgtagccgtgcccagggagggcccgcgtggggggggggaggggtcc
cggggggacggaagagtggacagagggacagcaggggccaatggagcggcagagtacttt
ggttctgaggagctacaggagaggttgtacctgaaccgcagtctgctggcccacatctcc
tcccagcaggtgctgcccttcgatgacaacatctgcctgagagagccctgtgagaactac
atgaagtgtgtgtccgtgctgaagtttgacagcctggcgccattcgtggcgtccgacacc
atccttttccgacccatccaccccatcgccgggctgcgctgccgctgccccacgggcttc
acaggagactactgcgagacagagatcgacctgtgctactccaaaccctgtggaacccac
ggcctgtgtcgcagcagagagggaggctacacctgcgagtgcctcgatgactatacaggc
aagcggtgtgagctgtcgtgccgctccgggcgttgtgccccagatgtgtgtaagaacggg
ggcacctgtgtgaacctgctggtgggaggattcaagtgcgagtgtccgtctggcagttat
gaaaagccctactgtgagatgaccaccaggaacttccccctgcagtccttcctcaccttc
aagggcctccgccagcgcttccacttcaccctctccctctcgtttgccacgaaggagcca
aacggtttgttactctacaatggccgcttcaacgagaagcatgacttcatcgctgtggaa
atcgtcaacgagcagatccagctcaccttctctgcaggtgagaccaagacgactgtgtca
ccccacatccttggaggtgtcagtgatggccagtggcatgtggtccaagtttactactac
aacaagccaatcataaaccaagccggcatgccccagggtccttctgaccagaaggttgtc
gtagtatccgtggacaactgtgacacctcagtggcgctgcgatttggtcatgtgatcggg
aactacacctgctctgcccagggcagccaatcaggatccaaaaagtctttggacctgact
ggtcctctcctcctggggggtgtgcccaaactgcctgaggacttccccatccagaaccgc
cagtttgtgggctgcatgaaggacctgaggatcgacaaccgccacatcgacatggctagc
ttcatcgctaacaacggcaccctaccgggatgctctgctaaaaggcacttctgcaacaac
aacccgtgtatgaatggagggacctgtgtcaacctgtggggctcgttcagctgtgactgc
cccctaggattcggaggtcggaactgtgagaaggtgatggccaaccctcagcgtttcctg
ggtaacagcctgttgcagtggactaacctggcggcggtggtgactgttccctggcatgtg
gagctcatgttccgcacgcgtcagcctagtgctaccctgctgcatgtcacggccggacag
caccacaacctcaccctacagctgcgggagggcagtgtggtgatgggcctgcagagaggg
gaggactccaccctgtcccgggtagaggaggtgacagtgaatgacggagactggcaccat
ctacagctggagctgaagggtgtcccggggggcgcgcccagacacaaggctgtgctctcc
ttcgaccatggactctacacggcaagtatggaagtggataataagctgaagggggcgaag
gtcaagactctgagtgtcgggggcatcactggggctgatgggaaaatacatcacggcttc
cgtggttgtgtccagggtctgcttgtgggggagacctcctccagctccgtgcctctcagc
atgtctcaggccaggagggtgaacatggagcagggctgcagcgtaccagacccctgtgtc
tctaacacctgccctcccaacagctactgcagtgatgactgggacagccactcctgtacc
tgcctcaccggttactatggcgataactgcatagacatatgtgcactaaacccctgtgag
caccaatcagcttgcaccaggaaggctagctcctcccgtggctacacttgtgactgtccc
agcaaccactttgggcagtactgcgagagaaagactgacctgccgtgtcccaggggttgg
tggggacataagacctgtggtccctgtgactgtcagacagacaggggcttcaatgccgac
tgcaacaagaccagcggggagtgccgctgcaaggataaccactaccgtccagaggccagt
gaggcatgtctgctgtgtgagtgttacccagtgggctccttctcgcgagcgtgtgagaga
gagagtggccagtgccagtgtaaaccaggggtcattgggcgccagtgtgaccgctgtgac
aacccatttgctgaggtgtcgcccaatggctgtgaagtgatctatgacagttgtccccag
gcgatagaggctgggatctggtggcctaggacaaagtttggtctccctacagccgtctcc
tgtcccaagggatctattggcacagctgtccgccactgtgatgaacacaagggatggctg
ccccccaacctcttcaactgtacctctgtcaccttcaccaaactcaaagccctgtcggag
aagttggcccgtaacatgtctctcctggactctgggcgtgtccagcagactgcagccatg
ttggccaacgccacgctacacacggtggagtactacggtagtgatgtaaaggtggcctac
cgcctcacccagagccttctgaagtacgagagccaccagcagggcttcagcctgaccgct
acacaggacgtcctattcactgagaacctggtgcgggtgggcagtgccatcctgtccccg
ggcacacggccacactgggagctgatccagcagacggaagggggcacggcggccctgctg
cgccagtttgagcagtacaccaacaccctggcacagaacatgaggaagacctacctcagc
cccttcaccatcgtcactccacacatagtcatctcaatagatcgcctccagaagatgaac
tttcccggagccaagctccctcgctaccagtctctgagaggactgaggcctcaggaccag
gagacggccgtcaccctccccgactccgtctttgagccacccttggagaccaagggccac
cgccacctggacaccttcccagaacccttcctgaggaaccacacgtccaacaggaagagg
cgccatagaggtcctgacgaccccgagcaggaagccatcgctagtgtgatcatcttccac
agcctggcctcacttctgcctgagagctacgaccctgataagaggagtctgagggtgccc
aagcgtcctgtcatcaacacccctgtggtcagcatcacggtccatgacaacgaggagctg
ctgcagcacaccctggacaaaccaatcactgtgcagttccgcatggtcaccgctgaggac
cgctccaaacccatctgtgtcttctggaaccactccatactagcggagaacggaggctgg
tcagctaaaggctgtgagatggtgttcaggaacaacactcacatcagctgccagtgttac
cacatgaccagcttcgctgtcctcatggacgtctccaggagagagaacggtgagatcctg
cctgtgaagctggtgacgtggagcacagtgggtgtgaccctggtcttcctctttctcacc
accctcttcctcctctgcctgcgggccatgcactgcaacaagaccagtatcatcaacaat
ggagccactgccctcttcatctccgaactcatcttcatcctgggcattaacctgccagac
aacccgttcatgtgcacaatcattgccatcttgctgcatttcttctacctgtgcaccttc
tcctggctcttcctggagggcctgcacgtctaccgcatgctgagcgaaatacgagacatc
aactacggacccatgcgcttttactacatgatcggctggggcgtgccggcctttatcaca
ggcctggcggtcggactggacccagagggttatgggaacccagacttctgctggctgtcc
atgtacgacactctgatctggagcttggcagggcccatcgccatggtggtgtttatgaac
atcttcctgtacatcctggcctccagagcatcctgctccattagacaccacagctttgag
aagaaagagccccctgtctctgggctgaggactgcgtgtggggttctcctcctggtcact
gtaacatgtctgttagctgtactctcagtcaacagtgacatgatcatcttccactacttg
tttgctggattcaactgtctccagggtcccttcatcttcttcttccgcatcgtcttcaac
aaggatgccaggaaagccatgcgctactgctgcagccgcaagcgcccagatcacatgatc
aagtccaagccctcttcatataactgtaccaccagctacatggatggcagactgtaccac
ctgccgtttggagactccagtgtgtctctgaacggcaccctgcagagtggcaagagccag
cagagctacgtcccttttgtccttagggatgatggtggcctgaataacagccaagcacac
atcgctctgaatgaacacggctcactcttccatgaaactaaagagcatttagataatccc
aactcggactctgacagtgacctgtctctggaggacgaccagagcggctcatacgcctcc
acacactcctctgacagcgaggaggaggagccctacccaacagaggaatgctgggaaagc
atggcctccaacgtgtccaagagaccacaccctcacgataacaacctgagtaagctgtac
tggccagtggagtatatgacgacagccagcaacagtgagggcctcgggggagcagacagg
ctgaagacagagtctctggccaacactgagctgggccagactcgggacacccgaggcatg
ccaagcgaaaggccaggggacaaggcaggtagctatgggaaggataacttgatgctgcta
cttcccagtctgcccaacctcaatgcacacccacagaaaggaatcctgaagaagaagcag
ctctcccccatcgcagagagaaatggtatcaaccgcatccataacgagctgtcaaagaat
gctccaggccacgcctcctctcagggctcctcctccagtgagagccgagggggccgggcc
aaacccagcctaccagatcagctgaatggtgtcggcatgagcatcaaggcgggaacagta
gacggtgactcgtcaggatcagagtcatag
DBGET
integrated database retrieval system
