Oncorhynchus nerka (sockeye salmon): 115139462
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Entry
115139462 CDS
T07952
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115139462 (med23)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
115139462 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DUF1664
BLOC1_2
XhlA
CLZ
HOOK
Crescentin
CALCOCO1
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
115139462
NCBI-ProteinID:
XP_029532732
EnsemblRapid:
ENSONEG00000003019
LinkDB
All DBs
Position
LG13:16883150..16913243
Genome browser
AA seq
1477 aa
AA seq
DB search
MSSTRKKTKSARAGHSKPAPSPDSPPDAANAGPTETLTVEMLQSVIGTLKTDIFGKIDSL
STNLRSEISMVKDELKKSIESITLQNKLDAHGVALSDLERDAADHSTRISELEANVGSLT
TKVAYLDNRCKDMESRMRRNNIRLLGIPEGVQGPRPTEFMAQLLQELLGLEENSLLDQAH
RTLRSRPRDGEPPRPLVIRVPFFHVRNDTLRRSGEASLVVPHGVEQMGVRDLLKALLDKI
QTIPNTVSSAVVQQLLAAREVVEYILDRNACLLPAYFAITEIRKLYPEGMLSHWLLGSLM
SDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEP
QTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHKQRCPVLEDQLVDLVVYAMERSETEE
QFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQF
ISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDISKPQSTHAFAMTCIWIHLNRKAQND
NSKLQIPIPHSLKLHHEFLQQSLRNKSLGMTDYKIALLCNAYSTNSECFTLPMGVLVETI
YGNGSMRITLPGTNCTASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIAL
APALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHY
RVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE
SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPL
QAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLE
TDKINQIGFRYTTKVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVW
KYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQS
DWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQQQSHYLPIYFGNVCLRFLPVFDIVIHRFL
ELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLK
DNRAPGWCLSETYIKCGMNPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFN
EFPNPAAHALHVTCVELMALAVPGKDVGNALLSVVLKSQPLVPRENITAWMNAIGLVITA
LPEPYWVVLQDRIVSVLGSPCFTTETEWVGYPFALLDFTACHQSYSEMYCSYVLALAHAV
WHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFY
EMLQAVDQHSQHLSYMDPICDFLYHIKYMFTGDSVKDQVEKIILTLRPAMKLRLRFITHT
SKMEPAAASVPQPSSSVSSPAPQSNPGPSNLPLSGAQ
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacccggaaaaaaacgaagtctgcaagagcaggccacagcaagcctgcgccc
tctcctgattcgccaccggacgctgctaatgccggccccacggaaacactgacagtggag
atgttacaatccgtgataggcaccctcaaaaccgatattttcggcaaaattgactctctc
tctaccaatctcaggtcagagatatcaatggtcaaagacgagcttaaaaaatctattgag
agtataacgttacagaataagctcgacgcacacggagtggctttatcggatttggaacga
gatgctgcagaccacagcactcgcattagcgagttagaggctaacgttggctcactgaca
actaaggtggcatacctcgacaatagatgcaaagatatggaaagtagaatgcggaggaac
aacattcgtctactgggaataccggagggagtgcagggcccaagaccaactgagttcatg
gcccagctgcttcaggagctgctcggtctggaggagaactcactgctagaccaggcccac
cgcactctgcgtagccgaccacgggatggagaacccccgcgaccattagtcatcagggtg
cctttctttcacgttcgcaatgacacactgaggagatcgggagaagcatcccttgttgta
ccgcatggtgtggaacaaatgggagttagagatctactgaaggctctgctggataagatt
cagaccatccccaacactgttagctcagctgtggtccagcagctgctagctgcacgagag
gtggtggagtacatcctcgacaggaacgcgtgcctcctgcctgcctactttgccattaca
gagatcagaaaactctatcccgaggggatgttgtcacactggcttctgggcagtctcatg
tcagattttgttgacagttttcgacccactgcaagaattaactccatctgtgggagatgc
agcctccttccagtggtcaacaactctggagctatctgcaactcctggaagctggacccc
accacattacgattccctctcaggggcatgctgcccttcgacaaggacctgtttgaacca
cagacagggctgctgcgatatgtgctggagcagccctactctcgagacatggtctgcaac
atgttagggctcaacaagcagaccttgaacattgctcagcacaagcagcgctgcccggtg
ctcgaggaccagctggtggacctggtggtgtacgccatggagcgctctgagaccgaggag
caatttgacgacggcggcaccagccagctcctgtggcagcacctctccagccagctcatt
ttctttgtgctcttccagttcgccagcttcccacacatggtgctctcacttcaccagaag
ctggccggtcgaggtctgatcaaaggccgagaccacctcatgtgggtcctcctccagttc
atatctggcagcattcagaagaacgccctggctgactttctccctgtcatgaagctgttc
gatcttctctacccagagaaagagtgcatcccggtgccagacatcagcaagccccagtcg
acccacgccttcgccatgacttgcatctggattcacttgaaccgcaaggctcagaacgac
aactccaagctgcagattcctatcccccactccctcaagctgcaccacgagtttctccag
cagagcctgaggaacaagtccctggggatgacagactataagatcgccttgctgtgtaat
gcctactccactaactcggagtgcttcactctgcccatgggcgtgcttgtggagactatc
tatggcaacggcagcatgcgcatcaccctgcctggcaccaactgtaccgcatcaggctcc
gtcacaccactacccatgaacctcctagactctctcaccgtccacgccaagatgagcctg
atccatagcatcgccactcgggtgatcaagttggcccacgccaagtccagcatcgccctg
gccccagccctggtggagacctacagcagactgctggtctacatggagatagaatctctg
ggcatcaaaggattcatcagccagctcctgcccaacgtgttcaagtcccacgcctggggc
atccttcacactctgctggagatgttcagctaccgtatgcaccacatccagccccactac
cgcgtccagctgctcagccacctgcactcgctagccgccgtgccccagaccaaccagaac
cagctacacctctgtgttgagagcacagcgttaaggttgatcacagcgttggggagttct
gaggttcagcctcagttcacccgcttcctcagtgaccccaaaacggtgctgtcagctgaa
tctgaggagctcaaccgtgccctcatcctgactctggccagagccacccacgtcacagat
ttcttcacaggctccgactccatccagggtacgtggtgtaaggacatcctgcagaccatc
atgaactttactcctcacaactgggcctctcacaccctgagctgtttccctgctcctctt
caggcgttcttcaagcagaacaacgttccccaggagagccgcttcaacctgaagaagaac
gtggaggaggaatacaggaagtggaagagcatgaccaacgagaacgacatcatcacccac
ttctccatgcagggatcgccgcccctcttcctgtgtctgctgtggaagatgctgctggag
actgacaaaatcaaccagatcggcttcaggtacaccacaaaggttctggagaggatcggg
gcgcgggcgctggtggcccatgtcaggacgtttgcagacttcctggtctatgagttctcc
acgtcggccggtggccagcagctcaacaagtgtatcgagatcctcaacgacatggtgtgg
aagtacaacattgtcacgctggacagactcatcctgtgcctggccatgaggagtcacgag
ggtaacgaggcccaggtctgctacttcattattcagctcctcctcctcaagcccaacgac
ttccgcaatcgcgtctctgacttcgtgaaggagaacgcccccgagcactggctgcagagc
gactggcacaccaagcacatgacctaccacaagaaatacccggagaagctgtactttgag
ggattggccgagcaggtgaacccgcccatgcagcagcagtctcactacctgcccatctac
tttggtaacgtctgcctgcgcttcctgcccgtctttgacatcgtcatccaccgcttcctg
gagctgctgcccgtctccaagtcactggagaccttactggaccacctgggaggactctac
aagttccacgaccgcccggtgacctacctgtacaacacgctccactactacgagcgtcac
ttgcgcgaccgcaccaacctgaagaggaagctggtgcacgccatcatgagctctctgaag
gacaaccgggcgccaggctggtgcctgagtgagacctacatcaagtgtggcatgaacccc
cgcgaagacaacgtctggatccccgatgacacctactactgcaaactcatcggacgcctc
gtcgacacgatggctggcaagtcccccgggccgttcccaaactgtgactggaggttcaac
gagttccccaacccggccgcccacgctctccacgtcacctgcgtggagctgatggccctg
gcagtgcccggcaaggacgtgggcaacgccctgctcagtgtcgtcctcaagagccaaccg
ctggtgcctcgggagaacatcaccgcctggatgaacgccatcggcctggtgatcaccgcc
ttgcctgagccttactgggtggtcctgcaggaccgtatcgtgagtgtgctgggcagtccg
tgcttcactacagagactgagtgggtgggttaccccttcgcgctgctggacttcaccgcc
tgccaccagtcctactctgagatgtactgcagctacgtgttggccctggcccacgccgtg
tggcaccactccagcatcggacagctctccctcatccccaagttcctgtctgaggtgctg
aagcccatagtaaagacagagttccagctcctctatgtgtaccacctagtggggcccttc
ctccaacgcttccaacaggagaggacccgctgcatgctggagattggagtggcgttctat
gagatgctacaggctgtggaccagcacagtcaacacctgtcctacatggatcctatctgt
gacttcctctaccacatcaagtacatgttcaccggggacagcgtcaaagaccaggtggag
aaaatcatcctgaccctgcgtccggccatgaagctccgtctgcgtttcatcacccacact
agcaagatggagcctgcagccgccagcgttccccagccctcgtcctctgtgtcctcaccc
gccccacagagcaaccctggcccctccaacctccccctgtctggggcccagtaa
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integrated database retrieval system
