Oncorhynchus nerka (sockeye salmon): 115139477
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Entry
115139477 CDS
T07952
Name
(RefSeq) syntaxin-7-like
KO
K08488
syntaxin 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
one04140
Autophagy - animal
one04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115139477
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115139477
04140 Autophagy - animal
115139477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115139477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115139477
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
115139477
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115139477
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Vac_Fusion
DUF4191
TOP_N
RTT107_BRCT_6
Cep57_CLD_2
DUF3040
DASH_Dad4
T7SS_ESX_EspC
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
115139477
NCBI-ProteinID:
XP_029532798
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Position
LG13:17687670..17695493
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AA seq
262 aa
AA seq
DB search
MAYQYGKVQDPNVLTQTIISNIQKITQQTSEIQRIVNQLGTPQDTTELRQQLQQKQQNVN
HLAKETDRCVKEFGSLPVTTEQRQRKIQKDRLINDFSNALANFQKAQRQAAQKEKEFVAR
VRAESRVSGGFPDDSFGGNGNPFESGGQAQVQSQSQEVAITEEDLQLIQERETSIRQLES
DITDINEIFKDLGMMVHEQGDMIDSIEAHVETADLHVQNASQQLAQAADYQRKSRKKICI
LIVVLVVLAVVVGLIIWASVKG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagtacggaaaagtgcaggacccaaatgtgcttactcagacgataatctcc
aacatccagaagataacacaacaaacatctgaaattcagagaattgtgaatcagttggga
accccacaagacacaactgagctcagacagcagctccagcagaaacagcaaaatgtcaac
caccttgccaaagagacagaccgatgtgtgaaggaatttggctctttgcctgtcacaact
gaacagcgccagagaaagatccagaaagatcgccttatcaacgacttctccaatgcactg
gccaatttccaaaaggcacagaggcaggctgctcagaaagagaaggagtttgttgccaga
gtccgtgccgagtccagagtgtcgggtggttttcctgacgacagctttggaggaaatgga
aacccctttgaaagtggggggcaggcccaggtccagtctcagtcccaggaggtggccatc
actgaggaagacctgcagctcatccaggagagagagacttccatcagacagctagagtct
gatattaccgatataaatgaaatatttaaggacttgggaatgatggtccatgagcagggt
gatatgatcgacagtatagaggcccatgtcgaaactgccgaccttcatgttcagaatgcc
agccagcagttagcacaggctgcagactatcagcgcaaatctagaaagaagatctgcatt
ctcattgtcgttctggtcgtacttgctgttgtcgttggtttaatcatctgggcatcagtt
aaaggatga
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integrated database retrieval system